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GT11732

CSHL Arabidopsis genetrap mutant lines

Original: GT11732

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT11732

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 39462 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT11732 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTATTCACCG TTTTCATCCC TAGGCGTACC 
    TGTCACCAGC TTGAGCAGCC AAATGCATAA CGTGGGTAAA GGGAACAACT 
    TCAAAGAGCT TCTTCAAGAG AGCAGCGTCA TTGATGTCTC CTTCAACAAC 
    AAACACTCCG CTTCTCTCCA AAAGGGCTTG CCTTGCTCTC TTGAGCGATG 
    GATCGTAGTA ATCGTTGAAG TTGTCAAGCC CCAGAACGCC ATCTCCGCGG 
    CGTTTGAGAG CGGCGGAGAC ATGGGTACCG ACGAAACCGG CGGCTCCGGT 
    GACGAGAACA GAGAAACCGC GGCGGGTACG GAGACGGGCG GAGGATCTGA 
    CCCGTTTCTC CCAAGCGGGT CCACCCCAGG AGTACGTACG AAGAGAACGG 
    CGAGAAGGAT CGGCGGGATT GGAGGAAACC GGAGATCGGT CCAAGAAGAT 
    GAAGACCAAA CCCACGAAGA CCAGAGACCA AAAGGCCAGC TTGGC

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR