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GT11893

CSHL Arabidopsis genetrap mutant lines

Original: GT11893

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT11893

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16322722 [Map]; Strand: w
      • AT3G44780.1 - [+] show detail - Cysteine proteinases superfamily protein
        Distance: -118; Region: promoter
    Flanking Genome Sequence: GT11893 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACTTGAGA 
    TGTATGTGAG AGAAATCTTC TTTGCGTGTA TGATAGCGTT TGATTGAGAG
    TGAATGTGGT CTTGATTTCA ACATTCTTAA GTTTTCTTGT GCATGAAGTC
    TTGTTATTTT CTAAACATCA ATGGAGGAAC TTCCTATTAA AGTAAGTACT
    TAAGATTTGA TCAATTTAGT TTCAGAAGTA GTGTTTATTG ATAAAGTAAA
    TAAAGATGTT CTTGTGATGA TTATTTGTTT AGTAACGACG TCGTAAATCT
    ATCTACGCAG GTTGAGATTC TATACGAATC CGATCAACTC TTTTCAGAAC
    TAAAGAAGAT TGGACAGTAC ATCTAGAGCT GTCAATTGGG CTTGACCATG
    ACCAAATGGT CTTGTCCAGT TGCACATTTT TTTTCTCTTG ACAAAAATGA
    CCAAGCCCAA AGTGACCAAG CCCAAGAGTG ACCAAGTCCA AGAGTGACCA
    AGACCAATTA AATATGTCCA TGGACATCAA AAAAAAGTTT AACATCATAA
    TAATAATCTA AAATGACCAT GATAAACATT GTAATTAGAT ATCGTAAAAA
    CGTTTTAAGA CAACATTCTT AAGAAATATC CATAAAGTTT AACATGACCA
    ACATTCTTCG ATCTT

AT3G44780.1

Model type
Protein coding
Short Description
Cysteine proteinases superfamily protein
Computational Description
Cysteine proteinases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19515.2); Has 19 Blast hits to 19 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR