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GT12477

CSHL Arabidopsis genetrap mutant lines

Original: GT12477

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT12477

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1018403 [Map]; Strand: w
      • AT1G03970.1 - [+] show detail - G-box binding factor 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT12477 - 3-prime edge 
    AACGGTAGAG GTTTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTATTTG 
    GAAAAGCTAC GACGATGAAA GAAGAATAAG AGAGAGAGAA GTTGAGATCG 
    GTGTGATGAT TTGGTCGGAG ATGGTGCGAT AATCTTATAG ATGAGGAAGA 
    TGAAGTAGAA AACGAATTAC GGCGAGACAG ATCGGAATTG GAAGAAGACA 
    TCAACCTAAC GGACGCTATT TTCGAGCTTG CTAGAATTGG AACGAATTTA 
    TCGATTTGGG TTTGTCAAAA AGAAAACTCA ATCGAAGATT TGGTGCTTGG 
    GTTCCCTTTA CACTATCATT ACTTAGGGTT TAAATTTCTT TAATTAACAA 
    CAATTTAAAT TTTCTGGAAA CCTTAAAAAG CAATGAAGAA GAAGATCCAC 
    CAACACGAAG AAGAAGAGGA AGAGGGGAGG GTAAAATCGT CCATTTTCGT 
    TCTCTAAAGT TCTCTTTTTC GGAGAATATA GATAAGTCCC TCAAATCAAA 
    GTTTTTTTAG AAAAAATGTC CTCCTATATT GACAATAACC CCTTAAAAAT 
    GTGTTTGTTG CTTTCATAGA TAACAGCTTT TTATTTCTG

AT1G03970.1

Model type
Protein coding
Short Description
G-box binding factor 4
Curator Summary
encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.
Computational Description
G-box binding factor 4 (GBF4); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT5G44080.1); Has 1357 Blast hits to 1357 proteins in 128 species: Archae - 0; Bacteria - 6; Metazoa - 355; Fungi - 8; Plants - 931; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Link
InterPro Scan - TAIR