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GT12592

CSHL Arabidopsis genetrap mutant lines

Original: GT12592

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT12592

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT12592 - 5-prime edge 
    TAATCTCCCT CCCAGTTACA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10338712 [Map]; Strand: w
      • AT2G24290.1 - [+] show detail - Protein of unknown function (DUF1068)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT12592 - 5-prime edge 
    CTTTCTCCCT GCTTGGAATA GATAGTCTCC CTCCAGTTAC AGTGCTCTCT 
    TTTCCACTAT CGCCATGATT GCTCAAACGT GAATTGAATG ATCTGATCCA 
    TAATCTAAAA AATTGAGCTT TCATCAGTAA CCGAAGCAAT GGCACGGAGG 
    TCTGGAAATT GCATGAGATG TCTAGTGATA TTCTCGGTGG TTTCAGCATT 
    ATTAGTGTGT GGACCTGCTC TTTACTGGAA ATTGAATAAG GGTTTCGTTG 
    GATCTGCTCG TAGCACCAAT TCCATTTGTC CTCCTTGTGT CTGCGATTGT 
    CCTCCTCCTT TGTCTCTCCT CCAGATTGCT CCCGGTACTG TTGTTACATC 
    TGGGTTTTCA ATTTGATTCA TAAATTAGGA GACTTTATAA ATCTGGAAAT 
    GCTTAGATCG TGCTTGGAAC AATCTTGTGG TTTCTGTGAT GGATCTTTCT 
    ATCAAAGCTA CGGCTTTTAA ATTGTATACA TAAGAAGAGT CTCAATTTCT 
    AATGAAGTTT CATTCTTTTG CAGGGCTTGC AAACCTCTCT ATTACAGGTT 
    AGATCTCGTT CCCAAGCTTT GAAACTCTGT ATGTATTGTT TCTTCAGTTT 
    CTCTAGTATC TCTACTGATT TAGTATGAAT GAGAATGCCT ATCTGATGAT 
    TTCTCACTGA GAACCCTTAC TGAATCGTTT GAAAACCTAG GAATTTGTGA 
    ATCAGTAACC AATGGGTGCA ACTATATCTC TTAAAGTTAG ACTTTATTTG 
    GGTTTCTTGA

AT2G24290.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1068)
Computational Description
Protein of unknown function (DUF1068); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1068 (InterPro:IPR010471); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1068) (TAIR:AT4G30996.1); Has 111 Blast hits to 111 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR