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GT12605

CSHL Arabidopsis genetrap mutant lines

Original: GT12605

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT12605

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18366689 [Map]; Strand: w
      • AT3G49540.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-ter...
        Distance: 124; Region: intergenic
      • AT3G49550.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -1220; Region: intergenic
    Flanking Genome Sequence: GT12605 - 3-prime edge 
    AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATC 
    AAATGAAAGA TTTTAGTTTT CAGGGGATTT TGCATCTTTT AATGTTTTCG 
    ATTGTAGGTG TTCCGGAGAA AAAAGAATCA GAGATCTTAA ATTCACACAC 
    GAACACGTTC GACTTAAGAA ATGTTGATTA CAAAATTTTC ACGATGCAAA 
    ACTGATTTAT ATTTAATTGA ATCAAAGAAG AATCATTTTG AGATACAAAG 
    AACAACAAAA GCCAAACCAA TCTGGTAGTA GCAAATCAAA CCAAGGTGAC 
    ATACAACAAC ATTCAAAATA CTTTCACAAA TTTAATTAAT CATCAAACGG 
    TGACAACAGC TTCTTTCTCT TCTTGTTTAC TCTCCTCCTT TACTGGTTCA 
    GCCTCAGCTT TTACTGGTTC AGCCTCAGCT TTTACTGGTT CAGCCTCAGC 
    CTTTACTGGT TCAGCCTCAA CCTTTACTGG TTCAGCTTCA GCCTTTTTCT 
    CCGCTTCCAC TGCAACCTCA ACCTTTTCGG GTGCAGCTAC GGCAACCGCC 
    TCCACCTTTG CTTCAGCGTT TTCTGTTGCA GCCTTCTCCA CTTTCTCAGG 
    TGCAACTGCT GCAGCCTCAC CAGCAGCAGC AGAAGAAGAC TCTTCGACGG 
    CTGCAACCTC T

AT3G49540.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; Has 9244 Blast hits to 5308 proteins in 962 species: Archae - 18; Bacteria - 2665; Metazoa - 1953; Fungi - 964; Plants - 333; Viruses - 74; Other Eukaryotes - 3237 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G49550.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24610.1); Has 55 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR