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Mutant Lines
GT12879

GT12879

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT12879

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 29835546 [Map]; Strand: c
- AT1G79310.1 - [+] show detail - metacaspase 7
  Distance: 1; Region: intergenic
- AT1G79320.1 - [+] show detail - metacaspase 6
  Distance: -1140; Region: intergenic

GAGAGCTTGT TGGTACATAA TAATTAGCGT AGATGAAGGG TAATATTCCA 
AATAAACATG ATCTTCAAGA ATTATTTCAA TAAATCAATT TCATAAGAGA 
TTACATACCA TTTTTTTTTA CCATGTTCAC TAGAAGTCTA GAATCCAAAA 
AATAGACTTG CGCGAAAGAA GAGTCTCTAA TCAGTAACCA CACCATATAG 
TTACTTAGCA TATAAACGGA GCATTCACAA AGCGGTCATT GCAATACAAT 
CCTGGTCTCT GAATAAACAT CTGTTTCTTC AGAATCTCTC TTGCCCTCAA 
TACCATTT

AT1G79310.1

Model type: Protein coding
Short Description: metacaspase 7
Computational Description: metacaspase 7 (MC7); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, male gametophyte, root; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 4 (TAIR:AT1G79340.1); Has 1196 Blast hits to 1169 proteins in 284 species: Archae - 7; Bacteria - 340; Metazoa - 0; Fungi - 299; Plants - 319; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G79320.1

Model type: Protein coding
Short Description: metacaspase 6
Computational Description: metacaspase 6 (MC6); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 5 (TAIR:AT1G79330.1); Has 1177 Blast hits to 1175 proteins in 293 species: Archae - 4; Bacteria - 354; Metazoa - 0; Fungi - 270; Plants - 306; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink).
Link: InterPro Scan - TAIR