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GT12944

CSHL Arabidopsis genetrap mutant lines

Original: GT12944

Phenotypes

Morphological phenotypes

Original description

  • fusca mutant (1/4-1/2 blackish/purple seed)
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • purple (PATO:0000951)

Original: GT12944

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7053203 [Map]; Strand: w
      • AT4G11670.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: -112; Region: promoter
    Flanking Genome Sequence: GT12944 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACATGTCA 
    GAATATGAAA AGGATCTTTG TAAGGTTATT TTGGTCTTTT GCTGATCAGT 
    CCTCGTGCTT TTTCCGCGCT TCCCCCTAAA CCCAAAGCTC TCTCACCTTC 
    TTCCATGGAG AGGGGACAAC AAAGTACACG CTGAAAAAGC CTCTCTGCAG 
    CTCCAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7053266 [Map]; Strand: w
      • AT4G11670.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: -175; Region: promoter
    Flanking Genome Sequence: GT12944 - 5-prime edge 
    CTTTCTCCCT GCTGACTGAA TCTGACTTTT CTTTTCTTTT TGGTAAGTCC 
    TTAAATGTTT TTGAATCATT CGTAACGACG GAACAATTAA TTTCCTGTTA 
    ACGATGTCGT TTTGAATTTC TTGGTAAGTC CTTTTAATTT CTTGTTAACG 
    ATGTCGTTAA AAGAACGTTT GTTTTATACT GTGACCATTT TCTTTGTGAT 
    CGGTGACCGC GCCGATTGTT TCTGACCATT GACCACGCCG GTTTACGATT 
    TTCAAATATC TTTTTGATTT TGTAATTAAT AAACGAGAAA CACAAAGCTC 
    AGTTGTTTCC ACGTTCCACA CCAAGAAAAT TAAAAAATAA AGTAGGACTA 
    ATCCAACGAT TTATTCCTAC ATACTATCAA TAGGCGCATT GACGCATTGT 
    AATAGAAGAT CAGGAGAAAG AGATATGGAC TAGATTTTCT AACTACACAA 
    CACTAAAACA CGAACCAGAG TTTACATATA TCTGAAACGT TCTGGTCTGG 
    GATGGTTCGT TCGGATTGAT CCTAGAACCA GAACAAGATT TTACTAGACT 
    TCGTTGTTTG CGTTCTTCAA GATGTTAAAC TTGCAGAGCG GGCAACGTGA 
    GTTTATATGA AGCCATTTAT CGATGCAAGT GCAATGAAAG TGATGGTTAC 
    AAGGGAGT

AT4G11670.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT5G06970.1); Has 193 Blast hits to 179 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 166; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR