GT1316

CSHL Arabidopsis genetrap mutant lines

Original: GT1316

Phenotypes

Morphological phenotypes

Original description

  • stunted plants
Anatomical entity
/structure development stage		 Phenotypes
sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)

Original: GT1316

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100388 [Map]; Strand: w
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: -261; Region: promoter
    Flanking Genome Sequence: GT1316 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CNTAGAAAGA GATACTAAAG 
    TCAAAATTGA ATGACTCTAA AATGTTGTTG GATGCTGATT TGATATCTCT 
    ATCTAAGCTC CTTTCTATCT CCAAAGACCA AACAAAATTT TACAGAGGCC 
    TTCAATCATT GAGCTTTAGA ACCTAAAGAA GAAAAACACT GAATCATCAT 
    AATGATCTTT CATGATCGCA TCTATTCATC TCACTCG

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR