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GT13222

CSHL Arabidopsis genetrap mutant lines

Original: GT13222

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT13222

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 997707 [Map]; Strand: w
      • AT2G03280.1 - [+] show detail - O-fucosyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
      • AT2G03280.2 - [+] show detail - O-fucosyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT13222 - 5-prime edge
    CTTTCTCCCT GATCATTGAT ATGAGACACC AACATATACC TTGTATCAGC 
    CCAGAAGGAT TTTTTATCAA GCTCAGGAAC AACAAGAGTC AAATTCAATA
    GCCTAGCAAC AGTCACCATA TCACAAATCT GAAACAAAAC AAGCATCAAG
    ATATTGCAAA ACCCTAAATT CAGCAAATGA GAGAGAGTTA CACGAACCGC
    TGCACGCATT TGATTCAAAC CACCATTACA GGACACTAGT AAAATTCCAT
    TACTTGTGTA ATTCCCTGCA AAAAAAATCC AAACTTTTCC TTAAATCTCT
    CAAATTCTCA ATCACCAAAA CAAAACTCAA TGAAGAAGAC AACAAAACTA
    ACTTGGAGGA GGAGGAGGCG TTAATGGAAC TGATTCAACA GGGAGAGAGA
    ATCTAGAAAT GTGATTGGTT AAACCAGTGA AGATTTGGGA ATGCCAAAAG
    AGCTGAATCA AACAAGTCCA AACCAAAATG CAAGAACAAA CTCTAAAGAA
    CCAAACTTGT AATCGAGCTT TGGGAATTGC TTGACTCGGA GGAGCCTTAT
    AGTCACTCCG CATCAGAGTA CTCTCCGATC TAA

AT2G03280.1

Model type
Protein coding
Short Description
O-fucosyltransferase family protein
Computational Description
O-fucosyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G14020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03280.2

Model type
Protein coding
Short Description
O-fucosyltransferase family protein
Computational Description
O-fucosyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G14020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR