1. Home
  2. Mutant Lines
  3. GT13274

GT13274

CSHL Arabidopsis genetrap mutant lines

Original: GT13274

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13274

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT13274 - 3-prime edge 
    TTTTCGTTAC CGGTGTATCC CGTTTTCGTT CCCGTCCCGC AAGTTAAATA 
    TGAAAATGAA AACGGTAGAG GCATTTTACC GACCGTTACC GACCGTTTTC 
    ATCCCTATAC ACACATTATA CCCGACCGGA TCGTATCGGT ATATTCA

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT13274 - 3-prime edge 
    TCCGGTGTAT CCCGTTTTCG TTCCCGTCCC GCAAGTTAAA TATGAAAATG 
    AAAACGGTAG AGGCATTTTA CCGACCGTTA CCGACCGTTT TCATCCCT

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT13274 - 3-prime edge 
    GTTCGTTTTC GTTACCGGTG TATCCCGTTT TCGTTCCGGT CCCGCAAGTT 
    AAATATGAAA ATGAAAACGG TAGAGGCATT TTACCGACCG TTACCGACCG 
    TTTTCATCCC TATACACACA TTATACCCGA CCGGATCGTA TCGGTATA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 230953 [Map]; Strand: w
      • AT2G01510.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13274 - 5-prime edge 
    TTCTCCGGAT TCATAACCCG TATAGGATGT CCCGGTCTCC CTTTAATGAG 
    TCCAAATGCA ATAGCGAGCT TCTCACTGTG ATGACTCAGA GAACATTCTT 
    TTTCCTCCAT TTCCACATCA TGAAATACTG AACACGTATC TGGAACATAC 
    CCCATTTTCC TTATCTTCTT CAAGATTTCA TCCAATTTCT CAGATATCGC 
    CTTTGATTGC GGATGTGATT TGTCTCCTCT ATTGAAAAAA TGGATTTTGC 
    CCTCGAATTC AACAGAACTA TAGGCTGCAA CCTTTTTAGT GCCCAGCTTC 
    CTCATTTTAC TCCTTACTTT GTCAACACAA TCCCATTTAC CAGCAGCTGC 
    GTAGATATTA GACAGTAGTA CGTGGTATGA ACCAATATCA GGAGCTGTTT 
    CAACAAGAAC GTCTGCCACT TTCTGCCCTA ATATCATATC ACGATGAACT 
    GCACAAGCAC CCAACAAAGC TCCCCAGATA CCGGTATCTG GTTCCACTGG 
    CATCTTTTTG ATAAATTCAT AAGCCTCCTC TAGAAGACCA GAGCGTCCCA 
    ATAGATCAAC CATACATGCA TAATGCTCTT TTCTAGGCTC CAGATTCTTT 
    TCATTCGACT AAACCATGAG ACTGAAATAC CTTTTTCCTT CATT

AT2G01510.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1); Has 35573 Blast hits to 13630 proteins in 255 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 94; Plants - 34882; Viruses - 0; Other Eukaryotes - 514 (source: NCBI BLink).
Link
InterPro Scan - TAIR