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GT13282

CSHL Arabidopsis genetrap mutant lines

Original: GT13282

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13282

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12345627 [Map]; Strand: w
      • AT4G23700.1 - [+] show detail - cation/H+ exchanger 17
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: GT13282 - 5-prime edge
    TTTCTCCCTG ATTAGAGGTT GCTTTCATTG GTCCTGGACA TGTTGTACCG 
    TTTGTTCCCA TGCTTTAAAG ATCTGACAAA TGATGAGAGA ATAAGTCATT
    GTGGTAAGTT AAAATAGCAC GTGAAGCGAT TTAAGACTTT TGATTCATTT
    ATCAAACATT ATCATGATAC ATTAATTACA GAGTAAAACT ATGATCATGC
    CTTTAACAAA AACAAAATTA TGATTAGTCA TTAGTCAATA ATTTTCTTGA
    TTACGTTATT TTTTCCTTGA AACCAAACAG ATCAGATCAA TACACGAGAT
    TTCGATAGGT AAAGAGGCGA TACTCACGGA TTAATATCTG AAAACGCAGA
    TTATATCGGG ACGGAGATAA TTTTTCCGAT CTAACTCGGT TGATTTAGCG
    TAGTTGATGA TTTATGTTCG TGAAATTGGA ATATTTTTGG GTTTTAAAGA
    GAGACTTGAG GTTTAGGATA AAGTGTTTGA GTAAGAAGCG GATGCAGTAT
    CAGGCCGTTA CTAGGGGTCT TTTTATAGGC TGCAAGTCAA CGAAATACCA
    ATAATGTCCT TATTTGCGCG GGAATGATTT CTTCTTCTGT TTTTTTTTTC
    CAAAAAA

AT4G23700.1

Model type
Protein coding
Short Description
cation/H+ exchanger 17
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 17 (CHX17); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: N-terminal protein myristoylation, cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10581 Blast hits to 10541 proteins in 2184 species: Archae - 402; Bacteria - 8255; Metazoa - 59; Fungi - 207; Plants - 679; Viruses - 0; Other Eukaryotes - 979 (source: NCBI BLink).
Link
InterPro Scan - TAIR