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GT13295

CSHL Arabidopsis genetrap mutant lines

Original: GT13295

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13295

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 27905 [Map]; Strand: w
      • AT5G01075.1 - [+] show detail - Glycosyl hydrolase family 35 protein
        Distance: -456; Region: promoter
    Flanking Genome Sequence: GT13295 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGTCT 
    TCAACCTCTG TATCTTCTTC ACCATATTTG TCTCTCCACT CCATCCACAT 
    TATCTTTTGT TATTTTTTCT TCCATTTTCT CATTCTCGTT TCTATCAATG 
    ATTCAATGGT GATCAAATAG ATACATCGAC GAGAAGACAC TGCTAATGGA 
    AAATAGAGAA TTCAGGACAC GTGGCTTACA AGAAAAATAA TAGTGGAGAG 
    CATTAAAGTG TAACCAATGA ATGAGCTTTG AGCTGTTTGA GATGCTTTCC 
    TCTCTTGTAC AGAGATTATC AGAGATAGAG AGAGAGCAAT AACTATGATC 
    TCGATTTTAA CCCACAACAT CACATTCAAG ACAGAGATCC AAAACCCCAC 
    ATGGCCTTAT TTCCCAATAT TAACACACAT CATTTTACAA TTTGCTCTCT 
    CTCTCTTTGT CTCTCTGTCT TTAAGAAACC TTTCTTCATT GTTTCCTCCT 
    CTTCCTCAAT CTCTAGAGAA GAAGATGAAG ACGTCAAGCT TTGTCTTCCT 
    TTTGGTTGTA ATAATCCTAA GCTTCTCACT ACTAGCTTCT TCTTCTGGTA 
    ATCAAATCAA TCCTCCTTGT TACTCTCTTT CATGTTTTTC ATTGTATACA 
    TTAATGATTA CATANTTGAA AACACACACA GAAATGAAAG TGGGGTTGGA 
    GGATTACAAT TTTCCAGTGG ATCCAACTCC GACAACAAAA GCTTCGATAA 
    AACCAGGTCC TATTGAGCAT GGAACTCCTC TCAATCTTAT ATTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 27973 [Map]; Strand: w
      • AT5G01075.1 - [+] show detail - Glycosyl hydrolase family 35 protein
        Distance: -524; Region: promoter
    Flanking Genome Sequence: GT13295 - 5-prime edge 
    CGTTGAAGCG GCGCCTTTTC TATAATACTA GATAGTATGT GGTTGTTGAC 
    TATTTATTTC TTGGGCTTTT AATGTTTTTT TTTTAATTTT TTACCTTATG 
    TTTTTGAATT ACGCAATAAA TAGTGTGTAA GAGAAGAGTA GTAAATTAGT 
    AGTAGTATAA TTAACCGTCT AATTGAGTTT C

AT5G01075.1

Model type
Protein coding
Short Description
Glycosyl hydrolase family 35 protein
Computational Description
Glycosyl hydrolase family 35 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35 (InterPro:IPR001944); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR