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Mutant Lines
GT13329

GT13329

CSHL Arabidopsis genetrap mutant lines

Original: GT13329

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13329

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 8534304 [Map]; Strand: w
- AT3G23700.1 - [+] show detail - Nucleic acid-binding proteins superfamily
  Distance: -516; Region: promoter
- AT3G23710.1 - [+] show detail - Tic22-like family protein
  Distance: 0; Region: exon1 (CDS)

GTAGAGGTTT TTACCGACCG TTACCGACCG TTTTCATCCC TACAGACAGG 
TGCCTTACCA GAATTGAATC GAGAGATTCT AGAATCTAAA GCTTGCTTAG 
CTTGATCACG AAACGAATTG AGAGCAGAGA ATATATTAGG TTTGTTGTTG 
TTCGTGTTGG CGTTGAAGAG AGGATTAAGG GTTTGTGAAA CGTTGAGGAG 
TAAATTGGAG CATTGAGATT GGAGATTTGA GAAGGATTGT TGTATATTAT 
TAAGCTCGTT TTGTTGTTTC GATGGTGGGA AAATGTTTGA ATTCATAGTT 
TTCTCGGGAA AATGATGCTT GAGACTCTGA GAAAGAGTAG TGAAGGGTTT 
TTGAAAGGCT TTGCGAAGAA GACGACGACA CTGAGGAAAA AGATTTGATC 
TCTTTGCTTG AATTAGAATT GTTTTTGTAA AGAAACCCTC TAATTATCCA 
ATGTTTACAA ATTGATCCTA TATGTTTTAA AATATAGCAC CTGTGAGCTG 
ACAAATGCCA CGTCA

5 prime edge [+] show sequence

Chromosome: 3; Position: 8534367 [Map]; Strand: w
- AT3G23700.1 - [+] show detail - Nucleic acid-binding proteins superfamily
  Distance: -579; Region: promoter
- AT3G23710.1 - [+] show detail - Tic22-like family protein
  Distance: 0; Region: exon1 (CDS)

CTTTCTCCCT GCCTGTCTGG GCGAGATTTC TGACGACGGT GGTGGTGCGA 
GGGCTCAGGT GACGGTTCCG ATTCGCGGAA GCGGGAAAGG ATTATCTGCT 
GATGCTATTG AGGAGAGATT GGCGGGAGTT CCTGTTTACG CGTTGAGTAA 
TTCGAATGAG GAGTTTGTGT TGGTTTCAGG GACTTCCTCT GGGAAATCTC 
TGGGTTTGTT GTTTTGTAAA GAGGAAGATG CAGAGACTCT TCTTAAAGAG 
ATGAAGAGTA TGGATCCTCG TATGAGGAAA GAAGGTTCAA AAGTTGTTGC 
TCTTGCTCTT AGCAAGGTAT AAGGAGGAAT CAATAACTCA ATTAGCTCCT 
TTAGTATTCT TCTGTTTAGT GGTTTTGATT TTTGTGTGTG TTGTTTGTTG 
CAGGTGTTCC AGTTAAAAGT TAATGGTGTG GCATTTAGGT TGATTCCTGA 
GTCTACTCAA GTGAAAAATG CCTTGAAGGT GAGTTGATTT TACGATCGAA 
CATATCTTTG GATACTCAAA AACTTTTCTT TTGTCACGGT AGGCGTTAGA 
CCTGCTGAAT ATGACTGTCA TCATTCATTA ACGAGGAGCT TTTGTGTTAA 
TTTAGTTCAG GGGCATTTTG ATTACTTCAG TGGTTTATTG TAGCTCTGTT 
TTCAGCGACT ATAGATAAGT CAGTTAGTTA

AT3G23700.1

Model type: Protein coding
Short Description: Nucleic acid-binding proteins superfamily
Computational Description: Nucleic acid-binding proteins superfamily; FUNCTIONS IN: RNA binding; INVOLVED IN: response to cold; LOCATED IN: chloroplast stroma, nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: ribosomal protein S1 (TAIR:AT5G30510.1); Has 30347 Blast hits to 20342 proteins in 2814 species: Archae - 227; Bacteria - 22388; Metazoa - 193; Fungi - 227; Plants - 347; Viruses - 0; Other Eukaryotes - 6965 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G23710.1

Model type: Protein coding
Short Description: Tic22-like family protein
Computational Description: Tic22-like family protein; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tic22-like (InterPro:IPR007378); BEST Arabidopsis thaliana protein match is: Tic22-like family protein (TAIR:AT4G33350.1); Has 104 Blast hits to 104 proteins in 42 species: Archae - 0; Bacteria - 39; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link: InterPro Scan - TAIR