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GT13341

CSHL Arabidopsis genetrap mutant lines

Original: GT13341

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13341

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14651071 [Map]; Strand: w
      • AT2G34720.1 - [+] show detail - nuclear factor Y, subunit A4
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT13341 - 5-prime edge 
    TTTTGGGTGA CAGAAATTAC CATGGGTCTC TGAGCTCATA CAGAGTTTGA 
    ATCAGTAGAT TCCGAACTTC GTCCTGAAGG AACCTGTGGT CGGGTTTGGG 
    AATCTGGACG TTCTTTCTTC GCCTGACTTT CATTGTTATC TGACCAGCAA 
    AACATACCAC CAAGAATCAG TTAGGAAGAT ACAACAATAA AACGAGAGCA 
    TAATGAAAAT GGTCAGAAAG AGAGACAAAA CCAGAGAGCT CATGTACTGA 
    AGAAGTCATG ATTCATGAGA AGACTGTCCT AGTTACAAGT CTGAGGAACA 
    ACAAACTGAA ACAACAACAA AGCACAAAAG TCAGTACCAA AGCCAAGAGT 
    TTGAGAATCG GAATTCACTA AACCAAAACC CCAAAATCAG AATTCAATCA 
    CAACCCTAGA ATCTAAAGCA AACCCAGAAC AGAGAAAAAC CAATCTTAAC 
    CTCTACTATC ACATCTCAAC ATACATAGCA AAAGCATTTT CCCGGAAACG

AT2G34720.1

Model type
Protein coding
Short Description
nuclear factor Y, subunit A4
Computational Description
"nuclear factor Y, subunit A4" (NF-YA4); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A7 (TAIR:AT1G30500.2); Has 682 Blast hits to 682 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 131; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Link
InterPro Scan - TAIR