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GT13355

CSHL Arabidopsis genetrap mutant lines

Original: GT13355

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13355

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11110865 [Map]; Strand: w
      • AT4G20720.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: 2812; Region: intergenic
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 898; Region: intergenic
    Flanking Genome Sequence: GT13355 - 5-prime edge 
    CCTACTTTCT CCCTGTATCG AATGTTATCC CTGCTATCCA GAAGATGCGA 
    TCTTTAGAAC TACGAATCCG TCTGAATAAT CCAGCTCACC ACGGGGCCGA 
    ATTCCCGACA AATCACAGGG AATCTCGTAA GGGTTAATAC ATCTACGGAT 
    CGCCCAGAGA GTCGTCTTTT CGGAGAAGTT GACCTCGCCT TAATCGAAGA 
    TATATGCTGA GAGATATAAA CGTTTACCTC AAGCAAGTGC AACCAGTCAT 
    GAGACCCAAC TCTATAAAAC CAGTAAGCTT CGGGATCGTT TTCCTTGAAA 
    ATCCTGATGA ACTAGGCAGT GATATACCTA TCTACAGATC GCCCCAAGAG 
    TCAGCTTTCT AAAGAAGCCG ACCTCGCCTC GATCCGAGCT GTCTATTAGG 
    AGAGATCATC ACTTCTCTGC ACTAGACACA ATTTCCCTGA CAAATCCGCA 
    GCTGTCGGAA CAGCCAACTT ACGAATCAAA CTCCAAGCGA CCTGGAAAGA 
    AACAAGATAC AATCTACGCG ACAACGGAAA GCTTCGAGTT TTATAGAGAC 
    CTATCTCATC TCTATAGGTG AATTCTTTCG ATGAATATCG CTGATTTTCT 
    ACTG

AT4G20720.1

Model type
Protein coding
Short Description
dentin sialophosphoprotein-related
Computational Description
dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT1G05090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR