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Mutant Lines
GT13357

GT13357

CSHL Arabidopsis genetrap mutant lines

Original: GT13357

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13357

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 20558511 [Map]; Strand: w
- AT5G50480.1 - [+] show detail - nuclear factor Y, subunit C6
  Distance: -24; Region: promoter

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAC 
CCTCCGATAA AAATCTCACT TCCAACATCC AAATCCCTAG AAATTGTAAA 
TGGCTGAGAA CAACAACAAC AACGGCGACA ACATGAACAA CGACAACCAC 
CAGCAACCAC CGTCGTACTC GCAGCTGCCG CCGATGGCAT CATCCAACCC 
TCAGTTACGT AATTACTGGA TTGAGCAGAT GGAAACCGTC TCGGATTTCA 
AAAACCGTCA GCTTCCATTG GCTCGAATTA AGAAGATCAT GAAGGCTGAT 
CCAGATGTGC ACATGGTCTC CGCAGAGGCT CCGATCATCT TCGCAAAGGC 
TTGCGAAATG TTCATCGTTC ATNTCCACTC GACCAACGNG GCTCAAAGCC 
GAGGAGAACA AACGCCACAC GCTTCAGAAA TCGGATATCT CCAACGCAGT 
GGCTAGCTCT TTCACCTACG ATTTCCTTCT TGATGTTGTC CCTAAGGACG 
AGTCTATCGC CACCGCTGAT CCTGGCTTTG TGGCTATGCC ACATCCTGAC 
GGTGGAGGAG TACCGCAGTA TTATTATCCA CCGGGAGTGG TGATGGGAAC 
TCCTATGGTT GGTAGTGGAA TGTACGCGCC ATCGCAGGCG TGGCCAGCAG 
CGGCTGGTGA CGGGGAGGAT GATGCTGAGG ATAATGGAGG A

AT5G50480.1

Model type: Protein coding
Short Description: nuclear factor Y, subunit C6
Computational Description: "nuclear factor Y, subunit C6" (NF-YC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C7 (TAIR:AT5G50470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR