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GT13360

CSHL Arabidopsis genetrap mutant lines

Original: GT13360

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13360

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 158733 [Map]; Strand: c
      • AT4G00356.1 - [+] show detail
        Distance: -2004; Region: intergenic
      • AT4G00360.1 - [+] show detail - cytochrome P450, family 86, subfamily A, polypeptide 2
        Distance: -2035; Region: intergenic
    Flanking Genome Sequence: GT13360 - 3-prime edge 
    TAAACGGTAG AGGTTTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGA 
    TATTATTACC ATTTACGTAA AAAAGTTTGA ACCTGGAAAA CATATATATC 
    TACGTAGAGT ACCGAATATT CTAAACCATT TAAAATATTT CATAATGATC 
    AACCATGATT GAAATCAAGT ATAAAAACTT GAACAATGAT CTTCTAG

AT4G00356.1

Model type
Pseudogene
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Link
InterPro Scan - TAIR

AT4G00360.1

Model type
Protein coding
Short Description
cytochrome P450, family 86, subfamily A, polypeptide 2
Curator Summary
Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.
Computational Description
"cytochrome P450, family 86, subfamily A, polypeptide 2" (CYP86A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 4 (TAIR:AT1G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR