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GT13374

CSHL Arabidopsis genetrap mutant lines

Original: GT13374

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13374

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1156973 [Map]; Strand: c
      • AT3G04350.1 - [+] show detail - Plant protein of unknown function (DUF946)
        Distance: -197; Region: promoter
    Flanking Genome Sequence: GT13374 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAACTTTA ACCCATCATC 
    AAACGTTTTA CACCACCAAA AGAAACCAAA AATAAGTAAA CACTTTCTCT
    TATCTCAAGT CGCAGAATGA CTAAACGTTT CGTCTACAGC ACTAAGATTT
    ACTACTTTAT TGTTATTATA TCTCTTCTTT GTGCTGTCTC CTTCTCCGCC
    GCTTCCACCG CCACATGTTA TCGAAATCTC ACATCCAAAC ACGTTTCCAA
    AACATGAAAA CAACCCTTTC TTACCCTCTC CTCCACCGTT TCTCCTCCCT
    TGTTGTTTCT CCTTT
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1156902 [Map]; Strand: c
      • AT3G04350.1 - [+] show detail - Plant protein of unknown function (DUF946)
        Distance: -126; Region: promoter
    Flanking Genome Sequence: GT13374 - 5-prime edge
    CTTTCTCCCT GGGTTAACCA TACAGATTTG AAAGTATTGA GGTTAAAACG 
    TATGAATAAA CTTTCCCGTT ACATTTCTGG TAAATGGACT AATTTGAATA
    TTTGTATAAT ACTGGGGTTA TTGTGAAAAG CTTTTAAAGA AAGGGAAAAG
    AAAAGAGAGC TTTTTGAGAA ACGCATTAAC ACACCATAAC TTCATCATCA
    ACCTTCTCCT CTTTCTTACG CAATTACAAC TTCAACGCCT CTCTATCTCT
    TCGCCGTGAA TGTCGAGATA GTCGTAAGCT CTCTGCTTTT CAAATTTCTC
    TCAAATTGAG GTAGAGAGAG AGGGCACAGA GATAGAGAGA GAGGGGCATA
    GGAAACGGTG ATTTTCCCAG TTCCCGGAGG AACAATCGGC TGATTTCTCT
    GTAATCGAAG AATCTAAACC TCACCCACTC GAAATCAGCT CGTGGGTTTT
    GGGGGGTCTC TATTAATTTC CAAATTCTGG AGAAAAATCT TGTATTTCTT
    CAAGATGTTT GGGTGTGATT GTTTTTACTG GAGCAGAGGA ATCTCCGAGT
    TGGATTCGGA ATCGTCCGAG CCAAAGCCCT TCTCACTTCC GGCTCCTCTT
    CCTAGTTGGC CGCAAGGTAC AAAAAACTTT CTTTACTGGA AAATGCTAAT
    TTATCTATAA ATTCAAATTG AAGTTGCAAG ATTCTGTATA TGGAATTGAG
    TTTTTCAGCT AGGCT

AT3G04350.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF946)
Computational Description
Plant protein of unknown function (DUF946); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT5G18490.1); Has 389 Blast hits to 369 proteins in 101 species: Archae - 0; Bacteria - 21; Metazoa - 15; Fungi - 143; Plants - 203; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link
InterPro Scan - TAIR