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Mutant Lines
GT13406

GT13406

CSHL Arabidopsis genetrap mutant lines

Original: GT13406

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13406

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 22658626 [Map]; Strand: w
- AT5G55940.1 - [+] show detail - Uncharacterised protein family (UPF0172)
  Distance: -578; Region: promoter
- AT5G55950.1 - [+] show detail - Nucleotide/sugar transporter family protein
  Distance: 0; Region: exon7 (CDS)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGGTTTC ATCAGCATCT 
GCGGCGCTGT CGCAGCTCTT GGAGGCATGT CTGTCTACAC GTGGCTCAAT 
CTTCCGGGGA AATCCATCGA TCACATGTCA AACAAGCAGC TGCCAAAGCA 
AAACGTCACC GTTTCAAAAC CTAAAGCCGA GGCTGACGAC GGAGGAGGAG 
AGACCGGAGT AACCGTAGTT TCTGTTGACC CACTTCTCTC CAAGACGATA 
ACTGCAAATA TCGTATAGTT TTACAATTTG ATTAGATTGC CAAAGAGAAA 
AAAAATGAGT TTTACTTTTT CTTCTTCAGG TTTTAGTTTG TAAAATTGGT 
TCAGTTTTGA TATCAAATTA GTGTAGTAAA GTATACTAAT AAAAATATTT 
TGATATCATA ATGTGACAAG AGGGCTTGGT GGGTTTATTT GTACGATAAT 
GAAATAGATG GTGTAGTTTA GAAGTAATGT AAAACTTGAT GTGTATTTTT 
TTTTTTGGCC CCCCCTGGGG GGGTTTTGGG GGGGCCATTT GGAAAATAAA 
AAAACCCTTT TGAATTTTTC CAAAATTTCC AAAACTTTTA GGGTAAAAAG 
GGAAAACTTG GGGGGAAACC GGTTTTCCGG GAAAAAAACG GGGTGACCCC 
AACCCG

AT5G55940.1

Model type: Protein coding
Short Description: Uncharacterised protein family (UPF0172)
Computational Description: embryo defective 2731 (emb2731); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0172) (TAIR:AT5G51620.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G55950.1

Model type: Protein coding
Short Description: Nucleotide/sugar transporter family protein
Computational Description: Nucleotide/sugar transporter family protein; INVOLVED IN: N-terminal protein myristoylation, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT5G57100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR