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GT13408

CSHL Arabidopsis genetrap mutant lines

Original: GT13408

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13408

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13103368 [Map]; Strand: w
      • AT3G32110.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT13408 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACCT 
    CCGCAGCTAG GTCTTTTATG AAGCGCACCC GATCACGGCA TGTTTTATTC 
    TCCCCAAAAA TATTGCTACA CCGCCATTTC CAACCCCACC AAACCGCCAT 
    AGCAAACATC GTCGACCAGT CACTACCCTC TGCCATAATA CCTTGCCTTA 
    GATTCGAGTA GAGCCACTCC AATAAGGACA TAGTGAAGAA CGACTGCTGC 
    AATCTCCTTG GTACAATACG ATCCCATATG CCCGACATAG CGGGACAATC 
    CCTAAGAACA TGTATGATTG ATTCTATGCC TCCTCGACAA ACTTGACAAA 
    CATCAGAATT ACACAAATGC CTTCTCTTAC GCTCGGAGTT CGTCATAATT 
    GCTTGGTTCA CTATCAACCA AAGAAAAACC CGTACCCGTT CCGGTGCCTG 
    GACTTTCCAC ACACGCCCAT ATAAACTACT CATATCCTGC CTCGGAGAAT 
    CATCATTAGT CAACAATGCA ACTGCTGATT TGACTGTGAA ACGCCCATTT 
    GAAGTCATTC CCCAAGCTAA ACGATCATGT GCACCTGTGA CACTATCTAC 
    TATCACAGCC AATAGATCAA GACGCTTATT TTCAGTCACA AAAGGTGCTA 
    TTTGTGACAT GTCCCAGCCT GTCCCATCTC TCCATAAGTC TCGGGCCGTA 
    CACAACATCT GAGCCGGGGG AAAGAGTACA ATAGAGTCAT CAGCAATAGG 
    CGTTTCAGAC AACCACCTAT CCGTCCAGAA CCTGATCTGT CTCCCATC

AT3G32110.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.9e-52 P-value blast match to GB:AAA39398 ORF2 (Mus musculus) (LINE-element)
Link
InterPro Scan - TAIR