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GT13409

CSHL Arabidopsis genetrap mutant lines

Original: GT13409

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13409

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25655690 [Map]; Strand: c
      • AT5G64110.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13409 - 3-prime edge 
    GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA GGTCCGGCTA 
    GGAGAACGGA GGCGTCACAG CCTTGAACGA AACAATCGTG AAAGTGCATA 
    CGCAAAATGC CTGGAGCATT GGCTGGATTA GCAAGATAGT TAGACTCAAC 
    CACGGACCGA ACTATCGATT CTACATTCCA GCATGCACTA CCGTAATACC 
    CAGTCCGTGG CCTTGGGAGG AAATTGTTTG TATGTGTTGC ATTCGTGGCT 
    AGGACAAGGA AGAACGGTAA GAGAACGTAG CAAGGATTTA AATTAGTAAA 
    ACTTCTCATT TTGGTTTCAT

AT5G64110.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: membrane; EXPRESSED IN: shoot apex, shoot, stamen, leaf; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR