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GT13412

CSHL Arabidopsis genetrap mutant lines

Original: GT13412

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13412

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 95904 [Map]; Strand: c
      • AT4G00230.1 - [+] show detail - xylem serine peptidase 1
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: GT13412 - 5-prime edge 
    CTTTCTCCCT GCTTAACATC ATCAAACAAA CAATGTCTTA GTTTCTCTTA 
    ACATATTCAA ATGAAGTTGA TGGTGATAAT GATGTTACCT AGCCAAGTAC 
    TTATCGTCTG TGTTCTTAGC AGCATCAACA CCACTTACAA GCGGATACGA 
    TTTGGCTTTT GGACTAAACA TGCTTATTCC CATCCCCTTT CAATCATCCA 
    ATTATGTCAA AACCCTAAAT TGAATTTAGC TAATTAAGAG ATTGATTTTG 
    AGATGCTTAC AGAGAAGGAT TTGCCGTTGC CGAGATCTAT TTTGCTCTTG 
    AACGTCCGAT CGATTCCACT TGCAGCAACC GTCAATATCC ACGGCTCATG 
    GTTCGTTACA GTTCCTGAGC TAGGCCCGTC GTTACCGGCG GACGCCACCG 
    TGAGGATTCC TTTCCTCATC GCGTGAAACG ACCCGACGGA TATCGAATCG 
    GAAGAGTAAT CGGCGATTGG ACCGCCGATA GAGATGGAGA TAATGTCTAC 
    GCCGTCGTGA ATCGCTGCTT CGAATCCGGC GAGTATGTCC ATGTCAGCAC 
    AGCCGGATCT CGCCCAACAA ACCTTGTACA TCGCTAACCT CGCCGACGGA 
    ACCGCGCCGC GGGCGGTGCC GTTTGCTATG CCATAGAGAC TCGCGTTTGC 
    GACTAAAACG CCGGCTACGG TGGATGACGT GTGCGTCCCA TGTCCGTCGA 
    TATCGATCGG TGATCGGACT TCGCCGGCAG GCACATTGCC GTCGTGCTTG 
    AAGTACTTGG

AT4G00230.1

Model type
Protein coding
Short Description
xylem serine peptidase 1
Computational Description
xylem serine peptidase 1 (XSP1); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G03620.1); Has 8915 Blast hits to 7721 proteins in 1255 species: Archae - 263; Bacteria - 5173; Metazoa - 170; Fungi - 606; Plants - 1952; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink).
Link
InterPro Scan - TAIR