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GT13416

CSHL Arabidopsis genetrap mutant lines

Original: GT13416

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13416

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3481091 [Map]; Strand: w
      • AT3G11120.1 - [+] show detail - Ribosomal protein L41 family
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT13416 - 3-prime edge 
    TCACCTTAGC CCTCATGGTG AATTCACAGA AGATTAACTC TTCACTCCTG 
    TGATTCTATG CTTATTTCAG GAAAATGAGC GGCCGCCTAT TCAGAAAGAT 
    TTTGTTGCTT CCACTCATTT TGCTTCTTTA TATGACAGCA AAACCCTAGA 
    CACTCGTTTC CTCTTTGTCC AAATATTGGG CCGATCGGGG CTAATTTTAT 
    GCCCAATGAA GCCCATACCG ATGACTTTCT AAATTGTAAC ATGATTTGTG 
    CCTTTCTAAA TTGTTACGAA AACTTTTATT TTATTGAAAT AATGGATTTT 
    GAAAAAAATA GCTTGTTATT TTTACGGAAA TATATCTCAG AATTTTACAT 
    GAAACTGTAT CTCATATGAA CATAGCGTTG TTTTATCATT TAGTTATTTA 
    CCTGAATTAA TAAGTCCATT TACCCTTATA AAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3481356 [Map]; Strand: w
      • AT3G11120.1 - [+] show detail - Ribosomal protein L41 family
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: GT13416 - 5-prime edge 
    TGAGACAGCG ATCTAAGTAG ATTTTCGAAC AAACCTGGTT TTCTGTTTTG 
    CTTTCGGTGT TAAATCCAAC TCTGTTTTGA GTTTCAGTTT GAATGTTTCG 
    TTGGACCAAA TTAATATGGA AGTTATGTTT TCTATTATAT ATCTTACAAA 
    TGTTGATGTT CTACTATTCT CTGAATTATA ATTTTGAGAT TAGATTTGGG 
    TGATTGCTTC AGATGTTGAT GATTGGAGGG AATATATAGC TATGGATGCT 
    TTAGAAGATG ATCATAGGAA CAAAGTGAAT ATGCTTGTAG TTGTCTTATT 
    TGATTCCTGG AATAGAGTCT AGTTGGCCCC TTACGGTACC AATGCAGTCC 
    AGTAGTTAGC TTTGCTTTAC GTCCGATAGG GGATCTGGGA TGAAGGATCC 
    TCTGATT

AT3G11120.1

Model type
Protein coding
Short Description
Ribosomal protein L41 family
Computational Description
Ribosomal protein L41 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L41 (InterPro:IPR007836); Has 185 Blast hits to 185 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 88; Fungi - 40; Plants - 48; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR