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GT13429

CSHL Arabidopsis genetrap mutant lines

Original: GT13429

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13429

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7392060 [Map]; Strand: c
      • AT2G17000.1 - [+] show detail - Mechanosensitive ion channel family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13429 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGATTTC CGGTGCTTAT 
    AATCTGTTTA TACGAGCTAT GAGACTTAAA GGGTTTGCGG AATTCCATCA 
    GAAAATCAAA AATAATCGAA AGAAAAAGGA AAAAAAAAAC CCAAAATTTA 
    AAATCTTTAG AACCAGAACC AGAACCTGGG AAAATGATGA ACAAAAGTTC 
    CGTTTTAGTT GGGAAACAAG AGTTCCAAGA ATTATTTGGT CCCCGGTAAC 
    TTAACTTACT AACAATTATA ATTGGGTTTA GGAGTTTTTA AAACCCCTAT 
    GAGTGGGATA AGGCCTTAAT ATAGAAATTA ATTGGCCATT CGATAAAAAA 
    CGATCCCTAA ATTTAAGGAA GGGGTTTTAC ACATCTCAGG TCCTAAGTTG 
    GGACTTTGAT GGTTTTCGTT TTAGGGGGGG CCCATTTATT AACATTTAAC 
    ACCACCCAAC ACAAGATTTC CCTTAGCCTT TGCGGGCAAA CAAAATGGTC 
    CTGGTTCCCT TCCGTCCTAA CCTCCACCAT AAACAAGGTT ATACGTGGGT 
    TTGGATCCTT TCCTTGGTGG TTAATAAAAA CCCCGGCTAA ACAGGCAAGA 
    ACTAGCTGGG TTATGGAATA AGGATTTCAA GGGGAAGAGG AGATAAGGCT 
    TAAGTTTGAA TTAGG

AT2G17000.1

Model type
Protein coding
Short Description
Mechanosensitive ion channel family protein
Computational Description
Mechanosensitive ion channel family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 6 (TAIR:AT1G78610.1); Has 1986 Blast hits to 1976 proteins in 685 species: Archae - 66; Bacteria - 1304; Metazoa - 0; Fungi - 206; Plants - 211; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).
Link
InterPro Scan - TAIR