1. Home
  2. Mutant Lines
  3. GT13484

GT13484

CSHL Arabidopsis genetrap mutant lines

Original: GT13484

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13484

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 240320 [Map]; Strand: c
      • AT1G01660.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: GT13484 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATTTG 
    AACAATGAAC CCACGGGGGT CCTGGTCCAC ATACCTGTGA GATAGGACAT 
    ATGAAATATG AGGGAGGCTG GCGTGTAACG GAATCCTCAT CGGAGAATCC 
    AGAAGGAGTT CCATGGCGAC GAGTGTAACT CTGAAGGAGT AATAGAATCT 
    CCGAACAGAC TGAGCTCGCT GCGTCTTTCT CAGCCGCCAC CTTGCTGAGT 
    TCTTCCTCTG TTCCTTTTCT ACGTCTTGCT TCTTCTTCAT ACAACCTCAT 
    GAAGTTTTGT CCTACAGAGC AAGCTTCTTC CTTCTCCTTC TTCACTTTCT 
    CTAGCTCCTC TCTTCTCNTC CACTCGACAA TNNTNTGCCT CTTTCCTCTG 
    CCTCACCTGT CAAAACGATC TTTTAATATA TGATGAAAGT AACTTCTAGT 
    TTCTAAATTA AATCTAAGAT TGATCACCTC GTCTTCATAT AGCTGCATCA 
    AGTTCTTGCT TATCATGCAC GCTTCTTCCT TCTCCTTCTT TGTCTTCTCA 
    AGCTCTTCCT CTTGTCTCTT CATAGATTCC TCCATCTCTT TCCTATGTCT 
    CAGCTGCTCG TTGTACAGCT GCATACCTAA

AT1G01660.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1); Has 73160 Blast hits to 42540 proteins in 2253 species: Archae - 866; Bacteria - 9091; Metazoa - 34168; Fungi - 4977; Plants - 4797; Viruses - 224; Other Eukaryotes - 19037 (source: NCBI BLink).
Link
InterPro Scan - TAIR