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GT13515

CSHL Arabidopsis genetrap mutant lines

Original: GT13515

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13515

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 14097616 [Map]; Strand: w
      • AT1G37057.1 - [+] show detail - transposable element gene
        Distance: 179; Region: intergenic
      • AT1G37063.1 - [+] show detail - transposable element gene
        Distance: 3977; Region: intergenic
    Flanking Genome Sequence: GT13515 - 3-prime edge
    AACGGTAGAG GTATTTTACC GACCGTTTCC CATCCTACAT TCACCTGCAA 
    TATCAATTAG TCTCCCCATA TCACTCCAAT TGTCAAACCA GAAAGAGGTG
    CGTGCACCAT TCTTTATCTC TGTTCTATAA AGAGACTTCG CAATATCTCT
    ATATTTGAGA ACTTTCTTCC ACATCCATGA ACCCAGACAT GTGTTATCTT
    TTACTGCCCA AATAGACCCT TGTTTTAGGA GAGAAGATCT AACCCATTCA
    CCCACAGCGA GTCCCCATTG GAGATGATAC GCCATATTAA TTTCAAGCAC
    CATACATCAT TCGCTTCTTT AAGAGACCGT AACCCAAGAC CCCCTTCTTG
    TTTCGGCTTA CACACATCTT CCCATGCGAT TTTTTGCTTT TGTTGTTTGT
    AGATCACCAC CGGACCATAA GTACGCAGAA CACAACTTAT CAATTTCTCT
    TATGCACGCT CGAGAGAGAG ACGAAATGCT CCCATCCAGA AGTTACATAT
    GCTCCAAAGA ACTGAACTTA CTAGGTTTAA TCTGCCTCCA TAAGACAAAT
    AACGTGCCGA CCAAGAACCA ATTTTCTTTT TTATTTGTTC CAAGAGAGGT
    AGATAGTCGG TAGAAGAAAG ACCTTTTGTG ACGAGAGGAA GTCCCAAATA
    TCTCACTGGG AGGGTACCAA CTGCAAAGGG AAATCGATCG GCTATATCAT
    GATGAGAATT GTCTGTCACT CCGGCAAGAT AAACTGTTGA TTTTTCCATA
    CTTATTCTCA GTCCCGAACA TCTAGCAAAC ACATCAAACA CTTCCACAAT
    TTCCTTCTAT AGACCGCACT

AT1G37057.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hAT-like transposase family (hobo/Ac/Tam3), has a 7.8e-25 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)
Link
InterPro Scan - TAIR

AT1G37063.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
transposase-related, weak similarity to Tam3-transposase (Antirrhinum majus) GI:16064, PIR|A39652 Hobo element transposase HFL1 (Drosophila melanogaster)
Link
InterPro Scan - TAIR