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GT13545

CSHL Arabidopsis genetrap mutant lines

Original: GT13545

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13545

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22223619 [Map]; Strand: c
      • AT3G60150.1 - [+] show detail - Protein of unknown function (DUF498/DUF598)
        Distance: 107; Region: intergenic
      • AT3G60160.1 - [+] show detail - multidrug resistance-associated protein 9
        Distance: 184; Region: intergenic
    Flanking Genome Sequence: GT13545 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACATGGA TAGTTCTCCA AGAACACACT 
    GAAAACTCAG TATAGAACCT AAAACACAAG TACTGATTAA AATGTTGAAC 
    TGAATTTTCT TCGATGCGCC ATGCTTCTAA CCATGGTGCT CTCTCCATTT 
    CTATGTTCAA CTTATGTAGT ACTAAATAAC TAGTTAGACT TTCAACTTAA 
    GCTTAACTGT GGAATT

AT3G60150.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF498/DUF598)
Computational Description
Protein of unknown function (DUF498/DUF598); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF498 (InterPro:IPR007523); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF498/DUF598) (TAIR:AT2G44525.1); Has 753 Blast hits to 753 proteins in 341 species: Archae - 0; Bacteria - 405; Metazoa - 118; Fungi - 87; Plants - 61; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60160.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 9
Curator Summary
member of MRP subfamily
Computational Description
multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink).
Link
InterPro Scan - TAIR