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Mutant Lines
GT13555

GT13555

CSHL Arabidopsis genetrap mutant lines

Original: GT13555

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13555

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 75179 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: 0; Region: intron1 (5UTR)
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: 0; Region: intron1 (5UTR)
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: -341; Region: promoter
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: -341; Region: promoter
Flanking Genome Sequence: GT13555 - 3-prime edge
```
CGACCGTTAC CGACCGTTTT CATCCCTATC CACCACCCAC TGGTTCGTAG 
ATTCCATAAC CTTGGATTGT GTT
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 75191 [Map]; Strand: w
- AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: 0; Region: exon1 (5UTR)
- AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: 0; Region: exon1 (5UTR)
- AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: -329; Region: promoter
- AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: -329; Region: promoter

AGAGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA TCCACCACCC 
ACAGTTCGTA GATTCCATAA CCTTGGATTG TGTTTTCATC TCACTCGACC 
AGCGACAAAT TCCTCCGATT TTAGTGAACA TGTCTCTGAT TTTGGTGTCC 
TGTGGTGGAT CTGCCGGAGC AAGTCTTAAA CTTGACTTGG ACTGTTTTTA 
CTAGCTAATT CTGGGCGCTA TTTCGTCTTC CTTGTTTCCA TTTCTATCTC 
TTTCTCTCTG GCCAGTCCTC ATATGTTATC ATTTCCTAGC TTTGCCACTA 
CTCATTACTT TCCCTTTATC GTGTTTATAT CTTAGCCCTG ATGGAAGCAG 
ACAACGGAGG CCCCAATTCT AGTCATGCAT CCAAACAACG TCTGCGTTGG 
ACGCATGAGC TACATGAACG CTTCGTTGAT GCCGTTGCTC AACTTGGTGG 
CCCTGATAGT AAGTTTCCTT TTTTCTTGTA TAGTCTATGG TAAATTTAGT 
AACTCATGTT TTCCTCATCA ATATCTGTGG TAATAATATG CACACCAATA 
TAATCAAATT GCTCTTCTTG TATGCTTTAC TACTATCCAT GAGAGGGAAA 
GCCTATCGTC TGTTTGCTTA GGGTTCCTAA ACA

AT2G01060.1

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01060.2

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.1

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.2

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR