1. Home
  2. Mutant Lines
  3. GT13557

GT13557

CSHL Arabidopsis genetrap mutant lines

Original: GT13557

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13557

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11752939 [Map]; Strand: c
      • AT5G31891.1 - [+] show detail - transposable element gene
        Distance: -741; Region: promoter
    Flanking Genome Sequence: GT13557 - 3-prime edge 
    AATGAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TAATGATCCC GCAACCGAAT GTGTCATTGG CATCTGACGG GCTGAAATGA 
    GCTTCCCAGT GATCGAGTAT GTCATTGATC AAACTGGGCT TCAGGAGCTC 
    CGCCTTGCGA TCGAGTGAGA TGCAGTGAAG TCGAGATTGA ATGGTCCAGC 
    GACCCTGTGA TCGAGTGCGA TTGACTGGAT GTCATGAGGT GGTGATCGAG 
    TGGTTGCTTC GGCTTCTATT CCCTTCTTCG TCCTTAGCTT GTCTGGTTGA 
    GTGTAGAACG AGCACATAGG CCTTCTAGTG ATCGAGTGGT GATCGAGTGG 
    TTCTGATGGG GTGATTCCTC TGGCTTCGCG ATTGATTGAA AGTGAGCTGC 
    TTGCTTCTCC GGGGTTGCGA TAGAGTGATT GACCCCGAGA GGGCTCCGAG 
    GCAGCGATAG AGTACTTTTG TTGAAGGCGT CATTGGGCAT TCTGACTTCA 
    TGTTCTGTTT TTCCTCTATC TGAACTTCAA AAGCATCCAA AGTACCTGAA 
    AACAACCAAA TATGCCATGC ACATGCAATC CTAATGCAAA ATCGTCCTAA 
    GTATGTAAAT CACACTAAAA CGACTCCTAA TGAATGAAAT GTGGATGAAA 
    CAATGACAAA GTGGTGAAGA ATGAATGCCT AAATCATGCA AATTATAGAC 
    ATATCAAAAA ATAAGACCAA TTTGTGACCA AACCGATACA AAACATGTGA 
    CCAAATTGTG ACTAAAATCT TTGCAATGTA AGACTGTCAC AT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11752886 [Map]; Strand: c
      • AT5G31891.1 - [+] show detail - transposable element gene
        Distance: -688; Region: promoter
    Flanking Genome Sequence: GT13557 - 5-prime edge 
    CTTTATCCCT GGGGATCATG ACGTGAAGAT TTGCTATATA TTTAGTTTCC 
    TTATTTGTTT CATCTCACTC GACCATAAAC TGCCTCTTAG GGTTTTCCCT 
    AGGGCATCCG TTATTATCTC GTCTATTTTG TAACTTTCAT ATCCGCAGTG 
    TTTCTCCTGC GACTTTGTAT TTTCAATAAT GCCTGCTTAG TTAGAGATCG 
    CTAAAGGGAT TTAGGTCAGT GTTTAGCTTT GCTTGAGGAT TTCTATCACG 
    GGAGTGAATT AATCTGTTGT TGAACTTGTT GTCTAGGGAT AAATTCTGTG 
    AAGTTTTGTC AACCGCCTCA ATAGATTAAG GAGACCACAC TATTCGATTA 
    CCCCATCCTA AGGAATCGTT TATCCATTTG ATTATTTGTT ATCATTTCTC 
    CTTTGTTATT CACCTGCCTT CTATTGCCAT ATCTGCTTTT AGTTTCATTT 
    C

AT5G31891.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 0. P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR