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GT13589

CSHL Arabidopsis genetrap mutant lines

Original: GT13589

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13589

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3374655 [Map]; Strand: c
      • AT5G10690.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing pro...
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: GT13589 - 5-prime edge 
    CCTACTTTCT CCCTTGAAGG TGTTCTCAAC TGCAGCCGAT AATCAGACTC 
    AAGTTGGGAT CAGGGTGCTT CAAGGTGAGC GTGAAATGGC AACAGACAAC 
    AAGCTCTTGG GAGAATTTGA TCTAGTTGGC ATTCCACCAT CTCCAAGAGG 
    AGTCCCTCAG ATCGAAGTGA CATTTGACAT TGATGCCAAT GGCATTGTCA 
    CTGTTTCCGC CAAGGACAAG ACGACTGGTA AAGTACAACA GATCACAATC 
    CGATCCTCTG AGTGTTGCGC CTTCCAAGAC GAGCACCATC AATTCCAAAT 
    GAGTTGCTAC TGATACAGAT TTAGTTCTTT CAATATATTC ACTTTTGTCA 
    GAAAGAAAAT GAACAAGAAA CAAAACCTTG TTCCCTAACC TTGTTCTTCT 
    TCGAGTTCTC TTGCAGCCTA TGCTGTTGGA GATTCCTTCT TCCCTTGCAC 
    CCCTTCCTTC TTTGTTCCTT CCTCTGGTAA TTCTTCTATT TGAGCCTTTG 
    TTTCGGCTGT TTCTTCTTTC ACTCTGCTGC TTTCGCTCTC TTCCTCTTTA 
    ACTTCTGCTT CTTCCTGTTC CTCTTGTTTA CTTTTTTCGA AATTCACAGC 
    TTCTTCATTC CTCGGAGAAA GTAGCAACTG TCTCGCTATT TTCCTCATCA 
    TCAACTTTCT TGCTATCAAA CTCCTCATAG ATCTCAATCT TCTTGCTATC 
    GACCAACACT TCTCGTCTCT TCTGCCTAAA CCCGCGGAAC AAATCACTCG 
    TCTCATCCAA AAC

AT5G10690.1

Model type
Protein coding
Short Description
pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein
Computational Description
pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR