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GT13624

CSHL Arabidopsis genetrap mutant lines

Original: GT13624

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13624

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16742267 [Map]; Strand: w
      • AT4G35180.1 - [+] show detail - LYS/HIS transporter 7
        Distance: -1802; Region: intergenic
      • AT4G35190.1 - [+] show detail - Putative lysine decarboxylase family protein
        Distance: -4332; Region: intergenic
    Flanking Genome Sequence: GT13624 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
    ATGACAGTAA TTGGTATTTG AAAATGACAT AACTGTTTAC GTTATATTTT 
    TTACATTCCT AAGTAGGACA ACATTATTTC AACCCGACAC GGAATCCACG 
    TGGAGAAACA TTATTTCTAT CGTTTCACAA ATAAAAGAAA AATGAAATAG 
    TATGAATACA TCTTTTGCGT CAATCAAATT CGTAAAATTC ACTCATGTTT 
    ACAAATTCTT CTGATTATTT T

AT4G35180.1

Model type
Protein coding
Short Description
LYS/HIS transporter 7
Computational Description
LYS/HIS transporter 7 (LHT7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G47670.1); Has 1572 Blast hits to 1571 proteins in 189 species: Archae - 0; Bacteria - 36; Metazoa - 144; Fungi - 199; Plants - 1047; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35190.1

Model type
Protein coding
Short Description
Putative lysine decarboxylase family protein
Computational Description
Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR