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Mutant Lines
GT13632

GT13632

CSHL Arabidopsis genetrap mutant lines

Original: GT13632

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13632

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 745795 [Map]; Strand: c
- AT2G02680.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCATGGACTT GTTCGGAGAA 
TTTCGTAAGG TGGAAATCGA TGGGAAACCA TTTCTTGTAT ACCACAAAGT 
TATGAAACCA TTACCACAAA TACACACCCC AAACTCCTCC GATGAAGAAA 
CCACCATCGA AAAACCATTA TCAATCCAAA ACGAAGAAAC TTCCTCCGAT 
GAAGAAACCA TTGACTCCGG TGACAACCTA CCTCT

5 prime edge [+] show sequence

Chromosome: 2; Position: 15118751 [Map]; Strand: w
- AT2G36010.1 - [+] show detail - E2F transcription factor 3
  Distance: -791; Region: promoter
- AT2G36010.3 - [+] show detail - E2F transcription factor 3
  Distance: -791; Region: promoter
- AT2G36010.2 - [+] show detail - E2F transcription factor 3
  Distance: -838; Region: promoter

CTATGATCGG ATTCTCTGTT TCCGTTCTCC TTCTTTTCTT GGGCCTTAAA 
TCCGTTTTTA TTGGGCTTCA ACTTGATAAC GACTTTACAT TCTCTCGGCT 
CAAATGGGGT ACACTCGTAA TGAACATGAA TGAACTTAAG GTACTACAAT 
ACAACAATGC CTCACACTCT CTAAGTGAAC CATTTTTCTT GTGACCTGTA 
ATAAGCTAAC GGCGCAGGAC AAGAAAAAAG CGGTACGAAA ACTTTGCCAA 
TCTAGGTCTT TACCAATTTC TATTTACCCT TTCTAACTAT TTTCTATCAC 
TCATTTGTCG TTAATACCAA TTAATGACAT CAATCATGTG CAATATTATA 
GTCCTCCAAA TACTGAATTG AATTATGAAT CCTTCATCAA GTGACTTTAG 
ACTTAATCTA CACTTCGCAT CAGTTTTTCC ACTGCCATAC ATGATACAAC 
AACCACTAAT CAATACAAAA GGATAAAAAA TAAAAATAAA AATATTATTA 
CACATATCAT AACGGAAACA GCAGCACATG TACTATAAAC AAACTCTATC 
CCCATCT

AT2G02680.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, RanBP2-type (InterPro:IPR001876), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G02690.1); Has 1749 Blast hits to 685 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 10; Plants - 1682; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G36010.1

Model type: Protein coding
Short Description: E2F transcription factor 3
Curator Summary: Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.
Computational Description: E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G36010.2

Model type: Protein coding
Short Description: E2F transcription factor 3
Curator Summary: Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.
Computational Description: E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G36010.3

Model type: Protein coding
Short Description: E2F transcription factor 3
Curator Summary: Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.
Computational Description: E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR