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Mutant Lines
GT13633

GT13633

CSHL Arabidopsis genetrap mutant lines

Original: GT13633

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13633

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 15118671 [Map]; Strand: w
- AT2G36000.2 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: exon2 (3UTR)
- AT2G36010.1 - [+] show detail - E2F transcription factor 3
  Distance: -871; Region: promoter
- AT2G36010.3 - [+] show detail - E2F transcription factor 3
  Distance: -871; Region: promoter
- AT2G36010.2 - [+] show detail - E2F transcription factor 3
  Distance: -918; Region: promoter

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGACCAAT 
GGCATTTCAC GAACCATCAA AGGGACTAAA AGCTCTAGAA CCAATTCTCC 
CTGTTAAGAC TTAAGACCAA TAACTAAACC GTTACGCTAA TCAGTTCACA 
CATTCATCAT CTTGCCTCCA ATTGTAGAAT CACAATTCTC TGCAAATCGC 
AACTCTACAC GGTTTCTGGA CTTACATACA CTTGATTTCT CGTTCACTAA 
CAATAACTAG ACCGAAATAC ATCGGAATCG TGAATTGTAA ATGAACATTC 
TTTCTCTTAT CAAGATTTAA CTCACCATCC CTGTGTGTGT CTCAAAATGT 
AGGCAGAGGC TGGTTTCTTC ATTCATTGAG TTCTTCATCA TCATTCATTA 
CAAAAATGTA CCTAAAAACA AAGCAAACCC CATCAATTCT CACCAATTCT 
CCAACTCCAT TAAACAAAAA AACAACAACA AAAAGCAAGA AACTCTCACT 
CACTTGCTTC CATGTTCTCC TAGCACACAA AACTCTATAA ATCAAGAATC 
TTTTTGTACA GTAACAAGGC GAGAGGTCTT CAATGGCGGA GAAGAATCAC 
AACATACCTC CAATGTATCT CTAAAACCAG CTTCATTAGT CTTCAACAT

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 15118733 [Map]; Strand: w
  - AT2G36010.1 - [+] show detail - E2F transcription factor 3
    Distance: -809; Region: promoter
  - AT2G36010.3 - [+] show detail - E2F transcription factor 3
    Distance: -809; Region: promoter
  - AT2G36010.2 - [+] show detail - E2F transcription factor 3
    Distance: -856; Region: promoter
Flanking Genome Sequence: GT13633 - 5-prime edge
```
CTTTCTCCCT GCATTGGTCT ATGATCGGAT TCTCTGTTTC CGTTCTCCTT 
CTTTTCTTGG GCCTTAAATC CGTTTTTATT GGGCTTCAAC TTGATAACGA 
CTTTACATTC TCTCGGC
```

AT2G36000.2

Model type: Protein coding
Short Description: Mitochondrial transcription termination factor family protein
Computational Description: Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G34620.1); Has 802 Blast hits to 604 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 717; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G36010.1

Model type: Protein coding
Short Description: E2F transcription factor 3
Curator Summary: Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.
Computational Description: E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G36010.2

Model type: Protein coding
Short Description: E2F transcription factor 3
Curator Summary: Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.
Computational Description: E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G36010.3

Model type: Protein coding
Short Description: E2F transcription factor 3
Curator Summary: Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.
Computational Description: E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR