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GT13648

CSHL Arabidopsis genetrap mutant lines

Original: GT13648

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13648

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11775330 [Map]; Strand: w
      • AT1G32560.1 - [+] show detail - Late embryogenesis abundant protein, group 1 protein
        Distance: 51; Region: intergenic
      • AT1G32570.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -1435; Region: intergenic
    Flanking Genome Sequence: GT13648 - 3-prime edge 
    AATGAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CTGCTAAGGG ATTGTACTGG TTTTCCCAGG TTTATAAGTG CAAACTTTCT 
    ATTAAATGAA TGATATACTC AGAAAGTCAA ATGGAAGTGA TGTCGTGAGT 
    CGCGCACGCT CTTGACATAC AAGATAGTGC ATGGAATAAC CAAAATATTT 
    ATCAACAAAC GTGTACGCAA AGTTGCAAAC ATCAACTCAA CGCTTAATCA 
    CTTAATTTTA AGCACATGCC TAAGAACTAA GAAAACCACT AAACGCCCCA 
    CACGTATAAT CAGGTTATTT TTTTTTATTT TAAAAAGATA GTAGGTCGGA 
    TTAGTAGTGA TGATGATTAT GATGTCCCGT CGGAGGATAA GTCGGATGAT 
    AGGTCTGAGG AGGCACTGAG GTAACTCCGG TAGGATTATG CCCGTAACCG 
    TGTCCCATAA CCGGTGCGGG AGCCGGTACA GGCGCTTGTT GAGGCACGTG 
    GGGACCATGA TCAGTAACAT GGTAGTGAGA TTGCTTAGCC ATAAGCTTGT 
    CTTCCGCATG AGCCGCTTTA GCCATGTGCA TATCCATATT CGCTTCTGCT 
    TCCTTCGCCT TTCTCCGTTG GTGCGCTATC TCTTTCTCCC TCTTTCGTCC 
    TCGCCATCGC CCGCTCCGCC TGCACGTCAT TAATATTTGA ATCAATCAAA 
    CAATCCATAA CTATTTAGTC ATAACAATGA TGTTAAACGA AATCATTAGC 
    GTAATTCTAA ATTTAGAACC TTCTCATCAG CTTTTGCTTG ACATATCACC 
    ATCTTCTCCT TGGCTGTACT AGCCATATCG CTTATCTTCT G

AT1G32560.1

Model type
Protein coding
Short Description
Late embryogenesis abundant protein, group 1 protein
Computational Description
Late embryogenesis abundant protein, group 1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 1 (InterPro:IPR005513); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 1 protein (TAIR:AT2G35300.1); Has 218 Blast hits to 218 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G32570.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR