1. Home
  2. Mutant Lines
  3. GT13657

GT13657

CSHL Arabidopsis genetrap mutant lines

Original: GT13657

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13657

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 425792 [Map]; Strand: c
      • AT1G02205.2 - [+] show detail - Fatty acid hydroxylase superfamily
        Distance: 3354; Region: intergenic
      • AT1G02210.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: 1756; Region: intergenic
    Flanking Genome Sequence: GT13657 - 3-prime edge 
    TTCATCCCTA TTCACCACCC CCAGGTTATT TAATTTACTT ACAAAAAGTT 
    CATACTTTAA CTTTGTAAAC CAAAAATGTT TTATTTATAC ATTTTCAGTC 
    TTAATTATTT TCTTGGAAAA ATTATCTATT CATTTATTTA TTTTTAAAAC 
    AATAATTTTG GTTAATTTTG TTTGGTCTTT ATTACAAGTT GTTCAGATAA 
    AACTGAATTA CTGTATTTCC AATTTGGTTT GAGTTTCAAG ATCACTTTAT 
    TTTTAAGTTT CATGTGATTT TAAGTTGAGA AGTTTATAAC CAAATTTGAA 
    ATATATTTGA CTATTTTTAG ATGCTGAAGG AGAACAAGAA CATGGTCGAA 
    GATTAAGGTG GAGATTATTG CAATGGCTTA GACGAGCTTC TCCCAATAGT 
    TCACTCTCAG TATTCTCATC AATTCGATTA TTTTCATTGG GGTTGTTTCA 
    CCGATCTAAC GCATGTACGC ATATAAAATA ATATTATGTT TTAAAAGAAA 
    ATAATAATCT GGTTATCAAA ACGACTTTTT CAAATATATA ATTTATTCAC 
    ATATAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 425696 [Map]; Strand: c
      • AT1G02205.2 - [+] show detail - Fatty acid hydroxylase superfamily
        Distance: 3258; Region: intergenic
      • AT1G02210.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: 1852; Region: intergenic
    Flanking Genome Sequence: GT13657 - 5-prime edge 
    TTTCTCCCTG GTGGTGAAGG GATGGTCTGA AGCGAGACAC AGATCTAAAG 
    CTTCCGGGAT GATGATTAAA GAATGCTCTG TTCTGTTTTG TATCATGGAT 
    GATGATTGTT AGTGTTCTTT AATGAGTGAA AAGTTGTTGT TTTTTGTAAC 
    AGTTTTGAGT TTGTAATTGT GTTTTTACAA AGTAACCAAA GATAAGTAAC 
    TACACACGAT CCCGACTTTG CTCCTCTCTA TCTCAACGGC GCATTCTCTG 
    TTTTAACAAA TAAGAAAACT CAAATGATTT ATCTAGATTA ATTGTTGTGA 
    ACTAAGATAA TTTTTTTGCA CAAATAACAA ATATGACCGT TACGAACTAA 
    AACCCAAATA ATTTTCTTGA TAAATTGTTA CCCATTAAAA CTCAAATAAT 
    ATTATGCACA ATAACAAATA TGACCGTTGA GAGCAAATTT TCATTATTTT 
    TGGCAGAATA ACTGAAATTT CCTTTTTTCT TAACCCCGTT GAAAAAAAAG 
    GAAACAATCC AAATTTTCAT TTTTCTA

AT1G02205.2

Model type
Protein coding
Short Description
Fatty acid hydroxylase superfamily
Curator Summary
Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.
Computational Description
ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1); Has 2658 Blast hits to 2653 proteins in 533 species: Archae - 0; Bacteria - 823; Metazoa - 248; Fungi - 388; Plants - 579; Viruses - 3; Other Eukaryotes - 617 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02210.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Computational Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 4 (TAIR:AT1G02230.1); Has 519 Blast hits to 519 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 519; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR