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Mutant Lines
GT13659

GT13659

CSHL Arabidopsis genetrap mutant lines

Original: GT13659

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13659

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 55465 [Map]; Strand: w
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -2016; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 1734; Region: intergenic

AACGGTAGAG GTATTTTACC GACCGGTACC GACCGTTTTC ATCCCTAAGT 
ATAGCAATGT TGATATTGTG CGTTAAATGT ATATGTATAT AATTCCAAAT 
TTCTAACAAT TGGTTTATAA ACGATGGCAC TAACATAACC TCATATATTG 
TGATACAACG AAAGGCACCG GATGGTGGAA CGCATCACGC ATCATGCATC 
CTCGATCCCT TTTCAAAGTG GTATGTAAGA GATCATTATT TCAACATAAC 
ATACATTTGC TATGATGACG CATTTTAGTC AAATTAGTTG TTTGTTCAAT 
CATATTAATA AGGGTCAACA GATATTTATA CGAACTGTAA TTAAAATGAT 
AAAATCCAAA GCGACAAGTT TGCTACTACC AAATGTGTGT TTAATATATA 
TAATTTAGAA ACATTGAATT TGAGAAAATG AGTATACGGT TGCACAAAAG 
AAGAAGAAGA AGAGGAGTAT ACCAACAAAA GGTTGTACGT AATATAATTC 
CGACCCCCTA AAAAGATATA TAATAAGGTG GAGAGCGAGG GATCTGAAAT 
TGATGGGTGT GTTTTTGTGT GCATAACAAA AGTTAAAAAT GGATTTATAT 
TATTTTTAAT TTTAAAATTC TTT

5 prime edge [+] show sequence

Chromosome: 4; Position: 81085 [Map]; Strand: w
- AT4G00190.1 - [+] show detail - pectin methylesterase 38
  Distance: 0; Region: exon3 (CDS)

ACATGTCTGA ATTCGATCTG AGAGCCACCG CCTGATGGTT TTCCGGTCCT 
GCCGTGTTCC TGATTGTTAT GTCTCGTCCC ACGAAACCGT CCCCCTCAGC 
CACTGTCATG CAATATGTTA CGTGGCAATA AAACGAATAT ATATAGTGTA 
AGTTGTTAAG GAGAAATGTC TAACCAAAAG TGGCAGATTT GTAAGTGGAA 
AATCCTCGGC CCTTGCTTTT GTCACCGGTG ATTATGGTTT TGCCGATACC 
ATCGCCAGTG ATCATGATGT TATTAGACTT GATTCCTACA TTGACATATT 
CCTCGTAAAC GCCTTGCTTG ACATGTATGA CATACCTTGG GCTTCCTTTG 
GGCCTCTCTC CAGCACCATT CACGGCCTCT TGGATAGTTT TGTAGTCCCC 
GGAACCATCT TGAGCCACCA CTACATCCAC TTTTTCACCT ATAGATAGTG 
TTTTCATTGT TATTTTCGAT ATCCCAAACT CCTTACCGTT TTGTTCCATC 
CTCTAAAAAA TACAAAAAAA AATCAAGTAA CAACGAGTGA ATTATTCAAA 
ACATGCTTGA TATTTAAGAT GGTTTTGAGA ATTTTGATTG GTTAGTAATA 
ATGTTAGAGC TACCTTGTTG ATGGCCAAGG TGTTAATGAC ATCAATGGTA 
ATGCTCTCCA AGGAATGAGA CGAGACACCG AGTTCTGACA TCTCTTCCTG 
ACATGTGTCT AGGTTG

AT4G00140.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00190.1

Model type: Protein coding
Short Description: pectin methylesterase 38
Computational Description: pectin methylesterase 38 (PME38); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, synergid; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 2963 Blast hits to 2921 proteins in 467 species: Archae - 10; Bacteria - 871; Metazoa - 1; Fungi - 198; Plants - 1837; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link: InterPro Scan - TAIR