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GT13665

CSHL Arabidopsis genetrap mutant lines

Original: GT13665

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13665

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8000068 [Map]; Strand: w
      • AT2G18450.1 - [+] show detail - succinate dehydrogenase 1-2
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT13665 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAT 
    CAAGATGCAA TTCAGTATAT GTGCAGGGAA GCACCAAAAG CTGTGATAGA 
    GCTTGAGAAT TACGGATTGC CATTTTCTAG AACAGAAGAT GGAAAAATAT 
    ATCAACGAGC TTTCGGTGGC CAGAGTCTCG AGTTTGGAAT AGGTTTTAAT 
    TGTTGACTTA TTGAATCTCA TGTATCTGTT TAATGTGGAA GATTACTTGC 
    TTAACCTTCT CATAGTTATT TCTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8000125 [Map]; Strand: w
      • AT2G18450.1 - [+] show detail - succinate dehydrogenase 1-2
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT13665 - 5-prime edge 
    CTTTCTCCCT GATCTTGATC ACCTACAGAA CCAAAAAACA CAAGTTACAT 
    ATAAATATAG AAACTTGCCG AAATAAGTAA CTTGTAGAGT AACAAAGAAG 
    CAAGTTTTAT CTGTGTATAC ATAAGTAGAT CATCAGCGTA CCTAACCAAT 
    CACTTCCTTT GACAGTATCA TACATATGCC ATCTCCAGTC ATCTACACTC 
    ATATTACCCA ACGCAGCATT TATACCTCCC TTCACAACAA ATTTCATAAC 
    TCAATCAAAA ACAAAAGCAA GCTTAATTAT AAGGCTAAAA ACAAGAGTAA 
    GCAAATGTTG GCACCTGAGC TGCAACAGTA TGGGAACGAG TTGGAAAAAG 
    CTTAGTGATA CAAGCCGTGT TAAAACCATG CTCTGATAAT CCTATTGCTG 
    CTCTTAGCCC AGCACCACCA GCTCCTACAA CAACCGCATC ATATGTATGA 
    TCTACGATCG TATACGATGA TTTATCCCCT GCCTTTTTCC AACAAAGAAC 
    ACAACAAATC AAAACCAAAC CAACTACGCA AAATCATACC AAAAATTGTG 
    TTCTAATCGA AACAAAGCTA GAAATTAGTC AACCAATGAA ATGATGAGAA 
    ACCCCAAAGA CTAAACGAGA TCGATGATTC AAACAATGTC TCGTACCGAA 
    GGAGGAGCTG AGAAGAATCT GGAGAGTTGA GAAGTGATGA AAGCGCCATT 
    AGATTCCGAT CTCCTCGACG ACGACGCAAC TCGAAGGCAC CGCCACATCT 
    CTCCGTCCAC TACTCACCAC GAACTTGTTA ACCCAAAAAT GGAAGAAGAG 
    TCGTTTTATA TAAATTGGCT TTA

AT2G18450.1

Model type
Protein coding
Short Description
succinate dehydrogenase 1-2
Curator Summary
Nuclear encoded mitochondrial flavoprotein subunit of succinate dehydrogenase complex .
Computational Description
succinate dehydrogenase 1-2 (SDH1-2); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase, flavoprotein subunit (InterPro:IPR011281), Fumarate reductase/succinate dehydrogenase, FAD-binding site (InterPro:IPR003952), Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (InterPro:IPR014006), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 17303 Blast hits to 17274 proteins in 2651 species: Archae - 275; Bacteria - 9814; Metazoa - 271; Fungi - 379; Plants - 135; Viruses - 0; Other Eukaryotes - 6429 (source: NCBI BLink).
Link
InterPro Scan - TAIR