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GT13673

CSHL Arabidopsis genetrap mutant lines

Original: GT13673

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13673

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8005291 [Map]; Strand: c
      • AT2G18465.1 - [+] show detail - Chaperone DnaJ-domain superfamily protein
        Distance: -447; Region: promoter
      • AT2G18470.1 - [+] show detail - roline-rich extensin-like receptor kinase 4
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: GT13673 - 5-prime edge 
    CTTTCTCCCT GCTGTGAAGG ACATCTAGTA ATGATTCTAG AGATATGGGA 
    ACTAAGAGCC CTACTCCTCC AAAATGAGAT CGAATCAATG ATTCTGTAAA 
    GAAGAGATTT TGGGGCTCTG AGAGTAGAGC AATGTAAGCT TTAAGCAAAA 
    GCATTGTCAT TGCTTGATTG GTTGGTTTTT TTTTTCATAT ATTTTTCGAC 
    TAAATTGGGT TATGTTTAGA TCGTTACGTA TGTGTATGAT TCTTGAAATT 
    TGATTCGATT CTCAAACATG AAATTAAAAT TGTTTGATTT TGAATTGTAT 
    CTACTACATG TCTACATTCA TAATCAAAGG GACAAGCTTT TTCAACTTTG 
    GCTTTATGCT GTTCTTTACA GGCTCTGTTT TTCATCGGTT TCCGAAATCT 
    ACCAAAAATT AAACCTAAAC AAACCGAACT CAAACCAGAT TGTTTAACGA 
    ATCACAATTA AACCGGTCCG GTTAAAAAAC CCTCGCGGGT GACGCCTACC 
    TTT

AT2G18465.1

Model type
Protein coding
Short Description
Chaperone DnaJ-domain superfamily protein
Computational Description
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G42080.1); Has 909 Blast hits to 907 proteins in 206 species: Archae - 6; Bacteria - 183; Metazoa - 307; Fungi - 24; Plants - 167; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G18470.1

Model type
Protein coding
Short Description
roline-rich extensin-like receptor kinase 4
Curator Summary
Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis.
Computational Description
roline-rich extensin-like receptor kinase 4 (PERK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 204492 Blast hits to 156803 proteins in 5113 species: Archae - 274; Bacteria - 30506; Metazoa - 74357; Fungi - 20978; Plants - 40817; Viruses - 2896; Other Eukaryotes - 34664 (source: NCBI BLink).
Link
InterPro Scan - TAIR