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GT13675

CSHL Arabidopsis genetrap mutant lines

Original: GT13675

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13675

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 166713 [Map]; Strand: w
      • AT2G01350.1 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: 0; Region: intron3 (CDS)
      • AT2G01350.2 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: 0; Region: intron2 (CDS)
      • AT2G01350.3 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: 0; Region: intron3 (CDS)
      • AT2G01350.4 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT13675 - 3-prime edge
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAGGTGTTTC 
    CATCATCTTA CTTGAAGACT TTTGATTTGT TTTGTATGTG TCTTTTAGCT
    TGAAGTGATT TAGTTTCTAA TATCTCAGGT TGAATGGATG CGAAAGGATG
    GAGATTATGT TCATAAAGGA TTGAAGTTTG GGAAAGTATC AGGGAATGCA
    CATAAGATTG TTGTTGCTGA AAGAGTTTTG CTCAACTTTA TGCAGAGGAT
    GAGTGGAATT GCAACCCTTA CCAAGGTCTT TTTTTTGTGT CTCTATAGAT
    TCTCTCTAGT GATTGGTGTG GTTGCATTCA TATTAACTTA GTGAGCTTAT
    ATCTTATAAT GACAAGGCTT TGTTGGCTTA GTACATGGTT TATAGTAACT
    CAACAGTATC CATTCCTTAT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 166772 [Map]; Strand: w
      • AT2G01350.1 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: 0; Region: exon3 (CDS)
      • AT2G01350.2 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: 0; Region: exon2 (CDS)
      • AT2G01350.3 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: 0; Region: exon3 (CDS)
      • AT2G01350.4 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT13675 - 5-prime edge
    CCTACTTTCT CCCTGGAAAC ACCTTCAAGG AGGGATCAAC ATGTTCAAAA 
    ATCATGTCAG CAAGAGCAAC TCCAGCAACA ATACCATCTT CCTTGGCCAA
    GAAATAAGCT TCCACTTCCA TATCAAACGG TATCGTAGCC ATACACGTTA
    CATCTCCTTC ACTCAAATCA TATATTTTTG ACCAACTCAA TTTCACAAAT
    TAAAAATCGA AACTTTAGAA GGTGAAGAGA GAACCTGTAT GACCAGCATC
    TTCAGCTAGG GCTAGTTTGA TAACAGCTTT CAAATCGTAA GTAGGGTGTG
    AAGGAGGCTT GATCCCCATT GAAACTTCTC CGGCCGTTTG AGTCGCTGAA
    GCAGACATTT TCACGAAGCT CCTGAAACAA TTGAGATTGA GTTTGGTCGC
    CACGATTACA GAAATGAACA AAGGAGAGAC TTAAAAGATT GGGTTTTGTC
    GGATAAAACC TTGGAATTGC GTAGAATTGA GGCGACAAGA ATCGAGAGAC
    AGAGATCATT GTAGAACTGA TTCAACTCTG TTTCTTGTTG GTCTTCTTTG
    TGTGAATATA ATAAACAGCT CTCAGAGAAA GAAATGATAT TTGGGTGAAC
    CAACATACTA TTGGGCTCCC TACCAAAAAA ACATACTATT GGGCTTTTAT
    TTGTGAAGCC CATTCCATAC TAACGTCTGC ATTTTAGTTA AAATCAACAT
    AAAACATAAC ACTCAAACAT GTAACAAGTA CGGAGTTCTA ACTCAAA

AT2G01350.1

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5853 Blast hits to 5853 proteins in 1914 species: Archae - 184; Bacteria - 3582; Metazoa - 59; Fungi - 129; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01350.2

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01350.3

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5825 Blast hits to 5825 proteins in 1916 species: Archae - 184; Bacteria - 3588; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01350.4

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link
InterPro Scan - TAIR