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Mutant Lines
GT13694

GT13694

CSHL Arabidopsis genetrap mutant lines

Original: GT13694

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13694

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 4007559 [Map]; Strand: w
- AT3G12610.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
  Distance: 0; Region: exon1 (CDS)

TACCGACCGT TACCGACCGT TTTCATCCCT AGCTGCGATC CTGATTCGGG 
TCGCGTCACT GATATTTCTC TCCGGGGAGA ATCTGAAGAC GCCATTTTCC 
AAAAGGCAGG CCGGTCCGGT TATATGTCCG GGTCGATTGA TCCAGCAGTT 
TGTGACTTAA CCGCACTCAC TTCCCTCCGT CTCGCCGACT GGAAAGAATC 
ACCGGAGAGA TTCCTCCGTG CATTACTTCC CTAGCTTCGC TCCGTATCCT 
CGATCTCGCC GGGCACAAGA TCACCGGGGA GATTCCCGCG GAAATCGGCA 
AACTCTCGAA ACTC

5 prime edge [+] show sequence

Chromosome: 2; Position: 5791331 [Map]; Strand: c
- AT2G13840.1 - [+] show detail - Polymerase/histidinol phosphatase-like
  Distance: -205; Region: promoter

CCTACTTTCT CCCTGCGTTA TTCATTACTT AAAGAGTGTC AGTGTCAGAA 
TAAAAGCATG TAGAAATACA ACCAAATTTA AAAGAGAAAA AAGAGAGAGA 
AAGCGTTTGT TATTAAAAAA GTGAATTTGT TTTTAAAAAA ATCAACACAT 
ATTTAGGCTA TTGTTTCTAG TTATGATTAT CGCCAAAATT TTCTTTTGTT 
GGGCTTGGTT TGTTTTCAGG CCCAATAGAA ATTAAAAACC ATTTCAAATT 
TCTACTCTTT T

AT2G13840.1

Model type: Protein coding
Short Description: Polymerase/histidinol phosphatase-like
Computational Description: Polymerase/histidinol phosphatase-like; FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), Polymerase/histidinol phosphatase, N-terminal (InterPro:IPR003141), PHP, C-terminal (InterPro:IPR004013); Has 4358 Blast hits to 4353 proteins in 1589 species: Archae - 140; Bacteria - 3576; Metazoa - 0; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 604 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G12610.1

Model type: Protein coding
Short Description: Leucine-rich repeat (LRR) family protein
Curator Summary: Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes.
Computational Description: DNA-DAMAGE REPAIR/TOLERATION 100 (DRT100); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G20820.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink).
Link: InterPro Scan - TAIR