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GT13715

CSHL Arabidopsis genetrap mutant lines

Original: GT13715

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13715

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 148694 [Map]; Strand: w
      • AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
        Distance: -120; Region: promoter
    Flanking Genome Sequence: GT13715 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAACC 
    GGCAGGATAG GAACTAAAAG AAAGAGAAGG GCAGAATAGG AATTGAGAAG 
    AGGGAGGTGG CAGTGGCAGA CATAAGTGGC TAGAAGTCAA AGCCATGACA 
    TCTTTTTTCT CTTCTTCTTA AATGATTCCT AACCTTTTTC TTAATTATTT 
    CTAATTAATT ACTTTATGCA GCAGACAAAA GGTGTTAATC AAAGAATCAT 
    TTTCTTTTTA ATATCTTACA CACGACAAGA CTAGTCGCAT GTGGATCAAT 
    TTACTATTTG GAATATTCAG TTTCTCTTTA GACTATGGAA TTATACTATA 
    TCCATATCTA ATAGAATCTC TCTCTTTCTT TAACCAAACA AACAAACAAA 
    ATCATGCTTA TTATGATTCC CAGATCAGGG CATTAACCAA TATTGCTAAG 
    ATAGAATCAT GGATCAAGAC AAGAGTGGAC ATGATTTTGA AGATGCAAAC 
    AATCAAAATA CTGAAATGGT GGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 148747 [Map]; Strand: w
      • AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
        Distance: -67; Region: promoter
    Flanking Genome Sequence: GT13715 - 5-prime edge 
    TCCTACTTTC TCCCTGCTGC CGGTGTTGAT GAATGAGGGT TAATATAGTA 
    ACTTTGGCGT TAGGAACTAT AGTTCCAAAA CCTTTTTCTG AATGAATTTA 
    CTTTTTGGAG GTATGAAGTC ACAGCTTTTA CAGATTTTAT CTTGCAAAAA 
    TTCTCTCCAC ATTTCAAACG TCTAATAGTT AAAGAGAGCT TTTGTTCTTT 
    TTTTCCCATG TCTATCAGTA TCACCACCGA GAAAATATCA TCAACACCAC 
    CAACCAAACA TTAACCCACC CGAGAGTACC CAATGCCATG TACTACTTAT 
    CTTCCTCTTC TTC

AT4G00340.1

Model type
Protein coding
Short Description
receptor-like protein kinase 4
Curator Summary
Encodes a receptor-like protein kinase that is expressed in roots.
Computational Description
receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink).
Link
InterPro Scan - TAIR