Home
Mutant Lines
GT13722

GT13722

CSHL Arabidopsis genetrap mutant lines

Original: GT13722

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13722

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 557077 [Map]; Strand: c
- AT2G02160.1 - [+] show detail - CCCH-type zinc finger family protein
  Distance: -964; Region: promoter
- AT2G02170.1 - [+] show detail - Remorin family protein
  Distance: 0; Region: exon5 (CDS)
- AT2G02170.2 - [+] show detail - Remorin family protein
  Distance: 0; Region: exon4 (CDS)

TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC GCCATGTGCT 
TAGCTTTTTC CGCTTCCTCC CACGCTGTAG CACGAGCTTC AGAAACACTT 
TTAGAAGTTT GTAGAGAAGC TTTGGTCTTT AATGATGTGG ATGCGTCTTT 
ATCTTCATCC TCCTTGCTAG CCCAAGCAGC AATGTTAAAT TTACCAAGTT 
GAGTACCCAA CACCATTATC TCTCTCCTAG TTTTCATTTG AAGCTCTTTC 
TCTGACAGTT CCTTGTTACT CATAGGACAA GCTGATGCTT GTCTGCCGGG 
ACTTGAAGGT TCACAAGATA TAGGACTTCG TATTGGCGTT GTTGCCCTAA 
TCGGTGTCCC GTTTCTAGAA GGTTCTTGGC TCGCTATACG AGTCATTTCA 
GTTCCCATGT CTCTCATTG

5 prime edge [+] show sequence

Chromosome: 2; Position: 557013 [Map]; Strand: c
- AT2G02160.1 - [+] show detail - CCCH-type zinc finger family protein
  Distance: -900; Region: promoter
- AT2G02170.1 - [+] show detail - Remorin family protein
  Distance: 0; Region: intron5 (CDS)
- AT2G02170.2 - [+] show detail - Remorin family protein
  Distance: 0; Region: intron4 (CDS)

CCTACTTTCT CTCTGTGGAC TAGGTAGTCC AAAGTTGAAT TGTTTGTCAT 
AGTCCTCTAG TTATTCTCGA AACTTTAAGC TTATGATGAG TTCTGTAATC 
TCCAGGTTCA GACGCGAAGA GATGAAGATT CAAGCATGGG AGAATCATCA 
GAAGGCGAAA TCTGAAGCCG AGATGAAGAA AACCGAGGTA AACTACACTA 
ACATAGCTAC GTAAGTTCAA GTCATGATTG TGAACAAACT TGGAAAAACA 
TGAATGATGA TGGTGGAGTT CTTGATATTG TAGGTTGAAG TTGAGAGGAT 
TAAGGGACGA GCACAAGACC GGTTGATGAA GAAACTCGCT ACAATCGAGC 
GCAAAGCAGA GGAAAAGCGA GCAGCGGCTG AAGCAAAGAA GGATCATCAG 
GCAGCTAAAA CAGAGAAACA AGCTGAACAA ATCCGAAGAA CAGGCAAAGT 
ACCTTCATTG TTGTTCTCTT GCTTTAGCTT TTGTTCTTAA ATCCAATCCT 
ATTGTGAATG TGATGTTGTT AATTCTCAAG AACACATCTT TCTATCATCA 
TTTGTATAAT AAAAGCTTTG AAAAACTTAT TTC

AT2G02160.1

Model type: Protein coding
Short Description: CCCH-type zinc finger family protein
Computational Description: CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02170.1

Model type: Protein coding
Short Description: Remorin family protein
Computational Description: Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 3690 Blast hits to 2594 proteins in 496 species: Archae - 6; Bacteria - 904; Metazoa - 645; Fungi - 344; Plants - 595; Viruses - 5; Other Eukaryotes - 1191 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02170.2

Model type: Protein coding
Short Description: Remorin family protein
Computational Description: Remorin family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 3690 Blast hits to 2594 proteins in 496 species: Archae - 6; Bacteria - 904; Metazoa - 645; Fungi - 344; Plants - 595; Viruses - 5; Other Eukaryotes - 1191 (source: NCBI BLink).
Link: InterPro Scan - TAIR