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GT13723

CSHL Arabidopsis genetrap mutant lines

Original: GT13723

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13723

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 148533 [Map]; Strand: w
      • AT2G01280.1 - [+] show detail - Cyclin/Brf1-like TBP-binding protein
        Distance: 0; Region: intron16 (CDS)
    Flanking Genome Sequence: GT13723 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATG GAAACAACAA GACAAGAGAA 
    GAGAGGATAA GAAACTTACG CTAGTATCAA AGAGCTCGTC CAAAATATCG 
    GTGTTGATTA ACCTGAGTCT CTGTATAAGA CTCAAAATCA GAAACCCAAG 
    AAAACACTTC TTCAAAAGAT ACAATATATA TTTACCTTCC TCTCAAGTGT 
    TCTGCAAACT GCTTCCGTGG CTGTAGCTGG TGGAGGTGCA TTCTTAGCTT 
    CCTCGGCACG TTTTCGTCGC TTTTCCTTTC TAGAATTCGC GACAGCTGCT 
    TTAGAAGCTT CCACAAGGTT TCTTGCATCT TCGGGGCAAT TAGCAGCCTT 
    CAGAGCTGCT TCCTTTTCTG CTTGCTCCTA CCAAACAATA TAAATTCTTC 
    ACCGAGTGTC CGAATCCAAG AGAAGATAAA TGATATAGCC TATCAATCAC 
    CTCAAGATAG TCTTTGTTTT GTAAATTCCA GGCCGTTGTC TTCAACCGCG 
    TTACGTCCTC ACCGAGAAGA ACATGTTCCA CCTAGAAAAC AGTGAACAAG 
    TGAAACTCTA GTAAGGGGAA AAAGACTCTA GAGCATTTCT CCATTTCATG 
    TTTCATATTC AAAAGTTTAA GCATTCGACC TCAGAATCAT CGTCGTCCGA 
    ACAGATGTCT GATTCATCCG AATATTCAGC ATGTCTTTCA CCCCCATATG 
    TTTCTCCTTC GCCTTTCTCT G

AT2G01280.1

Model type
Protein coding
Short Description
Cyclin/Brf1-like TBP-binding protein
Computational Description
maternal effect embryo arrest 65 (MEE65); FUNCTIONS IN: RNA polymerase II transcription factor activity, cation:chloride symporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670), Brf1-like TBP-binding (InterPro:IPR011665); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT3G09360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR