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GT13737

CSHL Arabidopsis genetrap mutant lines

Original: GT13737

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT13737

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20679386 [Map]; Strand: c
      • AT5G50820.1 - [+] show detail - NAC domain containing protein 97
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13737 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTATCCCTGA GCTCCGTTCT 
    TGCAATGTTG ATCCATGGGA CTTGCTAGGT TTGCTACAAA CTCTTCTCTC 
    TAATAATTAC TATTTCATCT CACTCGACAA GTATTGAAAA ATGTGGTTTA 
    GTGAATGTTG TACGTACACT TTTGTTGTAG GAGAGAAGAA CAAGGAAGTG 
    TATTACTTCG TGAAGAAGGA AGAGCGAGAG AGGAAGGGAA GAGAGACGTT 
    ATCCGGTTAT TGGGAAGAGT GTGAAGAAGA GGAAGTAATG GAGGCTGGTG 
    GTCGTGATTG TATTCATTTA GAAGGAAGGA GAAAGACATT TGCTTTCTTT 
    ATTGGAAAAA AACCCTCGAG GGACAATAAC TCCCATGGAT CATGTACGAG 
    TTCCGACTTC CTTTCCTCTA GAGCTACAAG GTGGTCATCG TCCCCTCTAC 
    CTCGGGTGAG TCACTCATTG GACTTTTATC TTTTTCTATA ACATATATTT 
    TTGTTGTAAG TAATAGTTTA GAGCTAACTA TATCAATGTT TTGGGTTTTA 
    AAAGGGTGAG GGAGGAAAAT GGAGGGCGGT GAAAAGTC

AT5G50820.1

Model type
Protein coding
Short Description
NAC domain containing protein 97
Computational Description
NAC domain containing protein 97 (NAC097); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 83 (TAIR:AT5G13180.1); Has 2430 Blast hits to 2425 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR