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GT13740

CSHL Arabidopsis genetrap mutant lines

Original: GT13740

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13740

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24807922 [Map]; Strand: w
      • AT5G61730.1 - [+] show detail - ABC2 homolog 11
        Distance: -24; Region: promoter
      • AT5G61740.1 - [+] show detail - ABC2 homolog 14
        Distance: -562; Region: promoter
    Flanking Genome Sequence: GT13740 - 3-prime edge
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACCC 
    TCTAATCTTC TTCTTCCTCT GTGATTATGA CTCTGCGAGA AGGCTTGCCG
    CTTTTTCATC AGCAATTCAC AGCTTTGTTC AAGAAGAATC TACTGCTTTC
    ATGGAGGAAC AAGAGAGCCA CGTGTCTTCT TCCTCACTCG A
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT13740 - 5-prime edge
    AAACTTTTTT TTTTTTTTTT TAAAAAAAAA AAAAAATTTT TTTTTTTTTT 
    TCTCAAAAAG GGGGGGGGGG GGGGAAATTT TTAAAAAGGT TTTTTCCCAG
    TTTTTTCCCG GGTTTTTTTC CCAAAAAGGA AAACCGTTTT TTTTTTTTTG
    AAAACCCCCA AAATTTTTTT TAACCTCCCC CCTTCCCCCA AGGATAAAAT
    TTGAAGGGGT CCCCAAAAAA TTTTTTGGGC TTTTGGGGGA AAATTTTTGG
    TTCCCCCCCC CTTTTAAAAG GGGGGGGGGG GCCAAATGGG GGTTCCCCGG
    GTAAAAAAAA AAAAGGGGGG TTTTTGGGGT TTTCCCCCCC TTTTTTTGGG
    TTTTAAAAAA CCCCCCAAAA AAAAATTTTT AAAAAAGGGG GTTTTGGGAA
    AAAAAAAAAA AAGGGGGGGG GGGAAAAAAA ATTTTTAAAA AGGGGGGGGG
    TTTTTTTTTT TT

AT5G61730.1

Model type
Protein coding
Short Description
ABC2 homolog 11
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 11 (ATH11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 15 (TAIR:AT5G61690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61740.1

Model type
Protein coding
Short Description
ABC2 homolog 14
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 14 (ATH14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 16 (TAIR:AT5G61700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR