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GT13741

CSHL Arabidopsis genetrap mutant lines

Original: GT13741

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13741

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 11108938 [Map]; Strand: c
    Flanking Genome Sequence: GT13741 - 3-prime edge 
    AATGAAACGG TAGAGGATTT TACCGACCGT TATCCACCGT TTTCATCCCT 
    ATTTAGGGGG AAAAGGCAAC CCTGGTAATT CGAGCTTACA TGGTCGAAAC 
    CGTAATGGGT GAGGAACGTA ATCACGAGGA AGCGCTGTGT GATGTTTATA 
    ATGAAAAAGC AAAGGAGGAG GCTGTAACTT GCGAACAGAG ACAGCTGCTT 
    CGCACCATGC CTTGCAGACG ACGGAAGCTT GTATGTTGGC TTTTAATCCA 
    AGCCCGGACA GTATCTCCCG CAGGAGATCT AAGGGAAGAA GAGCCCACAA 
    TCCTCCGATA TTATTACACT TGTTCTTCTT TTTTCCTTTA GCTGCTTTTG 
    CAGTGCATCT GGGGATTAGA AGAGAAGAAT TTAGGCAGCA TAAGTGAAAA 
    GAAAAATTAG AGGCTGGAAT ATATATAAGG AGAAGAAAAC ACTCACGATT 
    GGAGCTTTCT TCCTCTTTTT GTACAGGACA CTGCTGCAAG TG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18439611 [Map]; Strand: w
      • AT2G44735.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G18...
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT13741 - 5-prime edge 
    CTTTCTCCCT GCCCCTAAAC CACTTTTTCA AGGATGGTTG GGTGCTTGCG 
    AGAAAAAGCG AGTCCTATTA TGCTAGTACA CTTGTTCTTA ACCCGTTTAC 
    CCGTGAGAGC TTCTACTTAC CCCCAAGGAG ACACGAACAC AGATCCCGTT 
    TTTTAGCTTT CTCAGCCGCT CCTACATCAC CTAGCTGTAT GGTCATCTCC 
    TACACCCAAC TACGATCCTG CGGATCTGTT TTGATCGATA CTTGGCGGCC 
    TGGTGAAACC GAATGGACTA CACACTGCTT TGAGAACCAG TTACCCTTTC 
    GCTATTGGTC CAAATGTGTC TTCTCCAATG GCATGTTCTT CTGTCTCAGT 
    GAATGCGGCT ATCTTGGGGT TTTCGACCCC TCTAAAGCAA CGTGGAATAT 
    TCTTCCAGTG AAACCATGTC CGGCCTTTTA TCAGTTTGAG TTTGATTACA 
    CTCATAACCC AGTGTTTATG ACGGAGCATG AAGGAGACAT CTTTGTTATT 
    TATACACACT GCTACAACAA CATCCCAACC GTGTTTAAAC TGAATTCTAA 
    ACACAAGGAA TGGCAAGAGA AGACAGATCT AGGTGGCTTG ACAATATATA 
    CAAGTTGGCC TTCCTCTTTT GTAAGAGCTG GTCTCTCCCT GAG

AT2G44735.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G18720.1); Has 82 Blast hits to 82 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G29150.1

Model type
Pseudogene
Curator Summary
pseudogene of F-box family protein
Link
InterPro Scan - TAIR