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GT13745

CSHL Arabidopsis genetrap mutant lines

Original: GT13745

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13745

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2317366 [Map]; Strand: w
      • AT2G05980.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
      • AT2G05985.1 - [+] show detail - transposable element gene
        Distance: -906; Region: promoter
    Flanking Genome Sequence: GT13745 - 3-prime edge
    TTTCATCCCA TCATCGTCTT TGGTCGTCCC AATGATTGAC TCTTTTGTTA 
    TTTAAAAAGA AAAAAAGGAC AGTAGAGTTG GACTCTTGTT GGACTTACAG
    CTCCAGCTCG ACTTTTGCTT TCCTCTTGAG TAATCTTCAC TTTTTCTCCC
    AACTGCTTCA TCTCACTCGA CAACAGACNG GNCATGTATG ACAAATTATG
    AGTATCATCG GTTGGGAAGA ATTTGGGTGG TTTGGAAGAA TACAGTTCGA
    GTTACTCCGG TTTACAAAAG TGGACAAATG ATAACTTGCT CTGTTTTGAC
    GGATGAGAAT GAGGAAGAAT TTTTAGTTTC TTTCATATAT GCTTTGAATT
    TTGTTGATGA GAGAAGGGAA CTTTGGGAAG ATTTGAGAAA TCATTACGAC
    ATGCCAATGT TTCGTACAAA GAGTTGGATG ATTCTTGGTG ATTTTAATGA
    AATTTTGGAG GGGGAAGAGC ATTCCAATTT TGTTAACTCA CCTTTCATTC
    CACAGGGCAT GAGAGACTTC CAAGAAGCAG GTCGTTATTG TTCTTTAGCT
    GATATGAGTT ATCATGGCCC TGTGTTTACG TGGTGCAATA AAAGAGAAGA
    GG
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT13745 - 5-prime edge
    CTTGCTTTTT GAGTAAAAGT CTCCGAAAGG ATCTTATGTT AGCTCTTAGA 
    AGAATGAGGA AGATTGACCC TCACCGAACT TGTCTTCTCC AACTCCACTG
    TGGTGTTTTT TACCACCTGG TTTGGAGCCA AAGTTTCAGT AGTTTTTGAG
    CCCTCAGTCT CCATCACTTC CTCTGACGGG GTTATATGCA GGGATTCCTC
    ATTTTCTCCA TTTTCCTCAT GGTCACTCAG AACAGAATAA CGAGAGGTGA
    GGATGTTTAC TTGACCATAA ACTAATGGTA ACCCTTTAGC CTTTTCAGAA
    CTTTTACTTC CTTTCCCGGG AGAGACTATG GACCATCCAT CCCCTTCCTG
    TTGCGTGTCT TCTGCTATCA CCATATTCTG AAATCCTCTT TCTGATTA

AT2G05980.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.0e-42 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR

AT2G05985.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hypothetical protein
Link
InterPro Scan - TAIR