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Mutant Lines
GT13747

GT13747

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT13747

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 303441 [Map]; Strand: w
- AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
  Distance: 0; Region: exon3 (CDS)
- AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
  Distance: 0; Region: exon3 (CDS)

TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
GTAAGAGACT TTGCTTAGAG ACAAGACAAG TCAAGTTCTG GTTCCAGAAT 
CGTCGCACTC AGATGAAGGT ATGTGGAGAT TAAATCACAT CTTTAATCCC 
AAAAAATGAA TTCTTTTGTA ATAAAATCAT ATTGTGGCGC AGACTCAATT 
AGAGAGGCAT GAGAACGCGT TATTGAGACA AGAGAACGAT AAGTTAAGAG 
CTGAGAACAT GTCTATTCGT GAAGCAATGA GGAATCCAAT CTGCACCAAT 
TGTGGTGGAC CTGCCATGCT TGGTGATGTC TCTCTTGAAG AACATCATCT 
CCGTATCGAA AACGCTCGTT TAAAAGACGA GCTTGATCGT GTCTGTAACC 
TCACCGGTAA GTTCCTTGGC CACCACCATA ATCACCACTA CAACTCCTTC 
ATCTCACTCG A

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 303558 [Map]; Strand: w
  - AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
    Distance: 0; Region: intron2 (CDS)
  - AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
    Distance: 0; Region: intron2 (CDS)
Flanking Genome Sequence: GT13747 - 5-prime edge
```
GAACATACTG AAAGCAAAAA CTCAGATTCA TTAGATCGAA TAAAAGAGAT 
GATGGTAATA ACAATATGGA TATTGGATCG AAAGGTATAA TTACGATTCG 
AGTTCTTGGA TTTGTTGAGG AGTGTGTCGG TGATAACGTT TCTTCCGAGG 
AGGCTTATCA GCAGCGTCTT GATCTTCACC GGAGATACCT TCAACGTTAT 
CACTACCAGA TCTACTCTCA TGTTCATCTC ACTC
```

AT4G00730.1

Model type: Protein coding
Short Description: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary: Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description: ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 12660 Blast hits to 12608 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9962; Fungi - 223; Plants - 2228; Viruses - 1; Other Eukaryotes - 246 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00730.2

Model type: Protein coding
Short Description: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary: Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description: ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR