1. Home
  2. Mutant Lines
  3. GT13748

GT13748

CSHL Arabidopsis genetrap mutant lines

Original: GT13748

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13748

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 350589 [Map]; Strand: w
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 410; Region: intergenic
      • AT2G01818.1 - [+] show detail - PLATZ transcription factor family protein
        Distance: 2868; Region: intergenic
    Flanking Genome Sequence: GT13748 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCGGGTGGA 
    CGGGGCTCAG ATAGTTAGCT TCGTGGCAAC AACGATGAGG ATTCCAAGTT 
    TCGGTTTTGT GGCAATCACA CAAATGTCTG GGTTTCACGA ACTCGGAATC 
    GGTGTTTCAT CTCACTCCAC GACCATTTTT CACTATGTTT CGATCCGAAT 
    CTATTTGAGT AGTAATGTTG TCTTAAATTT TCTGTAGTGC TTTTATCCGT 
    TTCTACTTTT CTTTGTAACT TCTGTCACAA ATCAAAAATG GTATAAAATT 
    TCACTTTTTA CCAAAAATAA ATAAAAATTC ATGAGATCAA AATAAGAAAA 
    CTAGTAAGAT TGATTTATAT ATACTGAAAA AAATCAAGAA AAAATAATTT 
    TAAGAAAGAT CAAGTATATA TGAACATATA TACACATATT TGCTCCTTCG 
    ACGATGATGT TTTTTTTTCA AAATGTAATT TAAATAAAGA GTTGTTTTCA 
    ATGTTTGGAG CATAATAATT GGAGAAAAAT GTGCGGATTG TATTTACATA 
    AACATATATT TATGCAGATA AAATTTTATG C

AT2G01810.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 637 Blast hits to 622 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 216; Plants - 250; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01818.1

Model type
Protein coding
Short Description
PLATZ transcription factor family protein
Computational Description
PLATZ transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT3G60670.1); Has 397 Blast hits to 397 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 397; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR