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GT13759

CSHL Arabidopsis genetrap mutant lines

Original: GT13759

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13759

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26535304 [Map]; Strand: w
      • AT5G66450.2 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G66450.1 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT13759 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    GCTGCACCAT CATGTCGTAG AAGCAGAACG GATCCAAACA GAGCTGCTAC 
    AATCCATTTG CTCTGCCATT TGACAAAAAT GCAGTATAAA GAAAGGAAAA 
    AGCTTTGCTT AGTGTTTTCA TAGAAATATG CATTACATCA AACAGGTTGT 
    GTGCATCAGG GAATTCGAAT ACCAACCAGA CGATTAGCGA TTGCTTCAAT 
    CCCACCTCCG GCGTCGGATA CCAACTCGTT CTGGAGCTCC GGAGACGAAT 
    TATTGATGAA AGCCTCTTGC TCAAGCGCTT GAAATCGTTC TTCACCGTCT 
    CTGCGAGCAT TGGTTTTTAC TAAATCGGCC ATAGATTTAA AGCCAGAGAC 
    AGACCAGATT CTTCTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26535355 [Map]; Strand: w
      • AT5G66450.2 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G66450.1 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT13759 - 5-prime edge 
    CCTACTTTAT CCCTGGGTGC AGCTTTGTGG GCTGTGATTG GATCGGTTTC 
    AAATTCCGTG CTCTCAGTAG CTTTGAAACG TATACTTAAC CAAGAGAGAC 
    CTGTTGCTAC TCTCCGTTCT GATCCTGGGA TGCCTTCTTC TCATGCCCAA 
    ACCATTTCTT TCTACTCACT CGACAATGNC TTCTCCGGTA AACAATCAGT 
    CACAATGCTC ATCTGTTTCT TCCCTTGCAT TTGATCAACT CTTAAAGATG 
    ACTTTATTAC TCTTATTTCC ACAGTTATGG AGTGGCTTGG AACCAATGTA 
    CTCTCTCTGT TCCTTAGCGG CTTCATCCTC GCATTGGGTT CTTATTTCGT 
    AAGTCT

AT5G66450.1

Model type
Protein coding
Short Description
Phosphatidic acid phosphatase (PAP2) family protein
Computational Description
Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66450.2

Model type
Protein coding
Short Description
Phosphatidic acid phosphatase (PAP2) family protein
Computational Description
Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR